Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | AOT11_RS09875 | Genome accession | NZ_CP012881 |
| Coordinates | 2098075..2098692 (-) | Length | 205 a.a. |
| NCBI ID | WP_011079558.1 | Uniprot ID | Q7MHU7 |
| Organism | Vibrio vulnificus NBRC 15645 = ATCC 27562 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
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Genomic Context
Location: 2093075..2103692
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOT11_RS09865 (AOT11_16900) | aceF | 2094363..2096258 (+) | 1896 | WP_017421199.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| AOT11_RS09870 (AOT11_16905) | lpdA | 2096516..2097943 (+) | 1428 | WP_011079557.1 | dihydrolipoyl dehydrogenase | - |
| AOT11_RS09875 (AOT11_16910) | opaR | 2098075..2098692 (-) | 618 | WP_011079558.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| AOT11_RS09880 (AOT11_16915) | hpt | 2099084..2099614 (+) | 531 | WP_011079559.1 | hypoxanthine phosphoribosyltransferase | - |
| AOT11_RS09885 (AOT11_16920) | can | 2099713..2100381 (-) | 669 | WP_026060803.1 | carbonate dehydratase | - |
| AOT11_RS09890 (AOT11_16925) | - | 2100623..2102293 (+) | 1671 | WP_026060804.1 | SulP family inorganic anion transporter | - |
| AOT11_RS09895 (AOT11_16930) | - | 2102461..2103384 (+) | 924 | WP_017421202.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23717.02 Da Isoelectric Point: 6.1461
>NTDB_id=158044 AOT11_RS09875 WP_011079558.1 2098075..2098692(-) (opaR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDLHAKENIANITNAMIELVVQDNHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCDQHNPE
DLANLFHGICYSLFVQANRTNNTAELSKLVSSYLDMLCIYKREHE
Nucleotide
Download Length: 618 bp
>NTDB_id=158044 AOT11_RS09875 WP_011079558.1 2098075..2098692(-) (opaR) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCAACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTAAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
ATGGACTCAATCGCAAAGAGACCGCGAACTCGCTTATCTCCGCTAAAACGTAAACAGCAGCTCATGGAAATTGCACTGGA
AGTGTTTGCTCGTCGTGGCATTGGCCGCGGTGGTCACGCAGACATCGCTGAAATTGCGCAAGTTTCTGTGGCGACCGTCT
TCAACTACTTCCCAACTCGCGAAGATCTTGTAGACGAAGTGCTTAATCATGTCGTTCGTCAGTTTTCTAATTTCCTATCT
GACAACATCGATTTGGATCTTCACGCTAAAGAAAACATCGCCAACATCACCAACGCAATGATTGAGCTTGTGGTGCAAGA
CAATCACTGGTTGAAAGTTTGGTTCGAGTGGAGTGCGTCAACGCGTGACGAAGTTTGGCCTCTGTTTGTCACCACCAACC
GTACTAATCAGTTGCTGGTACAAAACATGTTCATCAAAGCCATTGAACGCGGTGAAGTGTGTGATCAACACAACCCAGAA
GATTTGGCAAACCTGTTCCACGGCATTTGTTACTCGCTGTTTGTTCAAGCAAACCGCACCAACAATACTGCAGAGCTAAG
CAAACTGGTCAGCAGCTACTTAGACATGCTATGCATCTATAAACGCGAACACGAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
92.157 |
99.512 |
0.917 |
| hapR | Vibrio cholerae C6706 |
72.864 |
97.073 |
0.707 |
| hapR | Vibrio cholerae strain A1552 |
72.864 |
97.073 |
0.707 |