Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | AOT11_RS09770 | Genome accession | NZ_CP012881 |
| Coordinates | 2075744..2076262 (+) | Length | 172 a.a. |
| NCBI ID | WP_017421185.1 | Uniprot ID | A0A087ID55 |
| Organism | Vibrio vulnificus NBRC 15645 = ATCC 27562 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2070744..2081262
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AOT11_RS09760 (AOT11_16795) | gshA | 2073485..2075050 (+) | 1566 | WP_026060800.1 | glutamate--cysteine ligase | - |
| AOT11_RS09765 (AOT11_16800) | - | 2075061..2075693 (+) | 633 | WP_017421184.1 | hypothetical protein | - |
| AOT11_RS09770 (AOT11_16805) | luxS | 2075744..2076262 (+) | 519 | WP_017421185.1 | S-ribosylhomocysteine lyase | Regulator |
| AOT11_RS09775 (AOT11_16810) | - | 2076321..2077598 (-) | 1278 | WP_017421186.1 | HlyC/CorC family transporter | - |
| AOT11_RS09780 (AOT11_16815) | - | 2077685..2078479 (-) | 795 | WP_011079539.1 | cytochrome C assembly family protein | - |
| AOT11_RS09785 (AOT11_16820) | ffh | 2078693..2080069 (+) | 1377 | WP_011079540.1 | signal recognition particle protein | - |
| AOT11_RS09790 (AOT11_16825) | rpsP | 2080386..2080634 (+) | 249 | WP_011079541.1 | 30S ribosomal protein S16 | - |
| AOT11_RS09795 (AOT11_16830) | rimM | 2080650..2081198 (+) | 549 | WP_017421187.1 | ribosome maturation factor RimM | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19024.86 Da Isoelectric Point: 5.2451
>NTDB_id=158040 AOT11_RS09770 WP_017421185.1 2075744..2076262(+) (luxS) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISP
MGCRTGFYMSLIGEPTEQQVAAAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAVGISVNRNDELA
LPEAMLKELKVD
MPLLDSFTVDHTRMHAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRKHLNGASVEIIDISP
MGCRTGFYMSLIGEPTEQQVAAAWTASMEDVLKVESQNKIPELNEYQCGTAAMHSLDEAKQIAQNILAVGISVNRNDELA
LPEAMLKELKVD
Nucleotide
Download Length: 519 bp
>NTDB_id=158040 AOT11_RS09770 WP_017421185.1 2075744..2076262(+) (luxS) [Vibrio vulnificus NBRC 15645 = ATCC 27562]
ATGCCATTATTAGATAGTTTTACCGTTGACCACACTCGCATGCATGCACCTGCGGTGCGTGTGGCAAAAACCATGCAAAC
GCCAAAAGGCGACACCATTACCGTGTTTGACTTACGCTTCACTGCACCTAACAAAGATATTTTGTCAGAGAAAGGCATTC
ACACTTTAGAGCACCTGTACGCAGGCTTTATGCGTAAGCATCTCAATGGCGCCTCGGTTGAGATCATCGATATCTCACCG
ATGGGCTGTCGTACCGGTTTCTACATGAGTTTGATTGGCGAGCCGACCGAACAACAAGTGGCGGCGGCGTGGACGGCTTC
GATGGAAGATGTGTTGAAAGTCGAAAGCCAAAACAAGATCCCTGAGTTGAACGAGTATCAGTGCGGTACCGCAGCCATGC
ATTCGCTAGATGAAGCGAAGCAAATTGCTCAAAATATCTTAGCGGTTGGTATTTCAGTCAATAGAAACGATGAACTAGCA
TTGCCAGAAGCAATGCTAAAAGAGCTCAAAGTCGATTAA
ATGCCATTATTAGATAGTTTTACCGTTGACCACACTCGCATGCATGCACCTGCGGTGCGTGTGGCAAAAACCATGCAAAC
GCCAAAAGGCGACACCATTACCGTGTTTGACTTACGCTTCACTGCACCTAACAAAGATATTTTGTCAGAGAAAGGCATTC
ACACTTTAGAGCACCTGTACGCAGGCTTTATGCGTAAGCATCTCAATGGCGCCTCGGTTGAGATCATCGATATCTCACCG
ATGGGCTGTCGTACCGGTTTCTACATGAGTTTGATTGGCGAGCCGACCGAACAACAAGTGGCGGCGGCGTGGACGGCTTC
GATGGAAGATGTGTTGAAAGTCGAAAGCCAAAACAAGATCCCTGAGTTGAACGAGTATCAGTGCGGTACCGCAGCCATGC
ATTCGCTAGATGAAGCGAAGCAAATTGCTCAAAATATCTTAGCGGTTGGTATTTCAGTCAATAGAAACGATGAACTAGCA
TTGCCAGAAGCAATGCTAAAAGAGCTCAAAGTCGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
87.719 |
99.419 |
0.872 |