Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | PJ17_RS05530 | Genome accession | NZ_CP010306 |
| Coordinates | 1073650..1073952 (+) | Length | 100 a.a. |
| NCBI ID | WP_002875928.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni subsp. jejuni strain 00-1597 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1068650..1078952
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PJ17_RS05505 (PJ17_05505) | rpsR | 1069013..1069273 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| PJ17_RS05510 (PJ17_05510) | lon | 1069333..1071708 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| PJ17_RS05515 (PJ17_05515) | - | 1071725..1072372 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| PJ17_RS05520 (PJ17_05520) | fliW | 1072533..1072922 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| PJ17_RS05525 (PJ17_05525) | proC | 1072922..1073653 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| PJ17_RS05530 (PJ17_05530) | ctsT | 1073650..1073952 (+) | 303 | WP_002875928.1 | hypothetical protein | Machinery gene |
| PJ17_RS05535 (PJ17_05535) | - | 1073949..1074611 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| PJ17_RS05540 (PJ17_05540) | - | 1074608..1075060 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| PJ17_RS05545 (PJ17_05545) | hemD | 1075057..1075686 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| PJ17_RS05550 (PJ17_05550) | thiE | 1075664..1076296 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| PJ17_RS05555 (PJ17_05555) | thiD | 1076286..1077098 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| PJ17_RS05560 (PJ17_05560) | - | 1077095..1077781 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| PJ17_RS05565 (PJ17_05565) | - | 1077778..1078539 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12161.32 Da Isoelectric Point: 9.0653
>NTDB_id=136149 PJ17_RS05530 WP_002875928.1 1073650..1073952(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 00-1597]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFKRLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=136149 PJ17_RS05530 WP_002875928.1 1073650..1073952(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 00-1597]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTAAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |