Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   AN159_RS08515 Genome accession   NZ_CP012694
Coordinates   1608907..1610166 (-) Length   419 a.a.
NCBI ID   WP_041423545.1    Uniprot ID   -
Organism   Neisseria meningitidis strain 331401     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1603907..1615166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AN159_RS13780 (AN159_08530) - 1604210..1604359 (-) 150 WP_033908521.1 hypothetical protein -
  AN159_RS08495 (AN159_08535) - 1604377..1604574 (-) 198 WP_002215316.1 hypothetical protein -
  AN159_RS08500 (AN159_08540) - 1604585..1605601 (-) 1017 WP_069972506.1 lysozyme inhibitor LprI family protein -
  AN159_RS08505 (AN159_08545) gltS 1605700..1606914 (-) 1215 WP_002216198.1 sodium/glutamate symporter -
  AN159_RS08510 (AN159_08550) - 1607132..1608538 (-) 1407 WP_002245780.1 tetratricopeptide repeat protein -
  AN159_RS08515 (AN159_08555) kpsS 1608907..1610166 (-) 1260 WP_041423545.1 capsule biosynthesis protein Regulator
  AN159_RS08520 (AN159_08560) - 1610303..1612417 (-) 2115 WP_069972507.1 capsular polysaccharide biosynthesis protein -
  AN159_RS08525 (AN159_08565) rfbC 1612441..1612980 (-) 540 WP_002245778.1 dTDP-4-dehydrorhamnose 3,5-epimerase -
  AN159_RS08530 (AN159_08570) rfbA 1613034..1613900 (-) 867 WP_002221803.1 glucose-1-phosphate thymidylyltransferase RfbA -
  AN159_RS08535 (AN159_08575) rfbB 1614006..1615031 (-) 1026 WP_002236574.1 dTDP-glucose 4,6-dehydratase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 48651.44 Da        Isoelectric Point: 8.6667

>NTDB_id=135941 AN159_RS08515 WP_041423545.1 1608907..1610166(-) (kpsS) [Neisseria meningitidis strain 331401]
MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKTVHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQ
EYITQHHIQAVVCFGDTRPYHVIAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLNYYIEDIQIAKRVEAGKYGKFFI
VPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAPADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVP
LPVFLRHGLGMVTINSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWSHPTPPDKELFHAYRMYHLNVTQINGNF
YSQVFFPNKNTSDSSTPTT

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=135941 AN159_RS08515 WP_041423545.1 1608907..1610166(-) (kpsS) [Neisseria meningitidis strain 331401]
ATGAAACAGACCGTCCTCAAAAATAACCTGCAAAACCTGCTTGAAAGCGCAGAAAATATCCTGCTGCTTCAAGGCCCTGT
CGGCGATTTTTTTCTGCGCCTTGCCGACTGGCTGACTGCAAACGGCAAAACCGTACATAAATTCAACTTTAATGCAGGCG
ACGACTATTTTTATCCGCCCACTCAAGCGCATACCGTTGTTTTTAACGACAACTACGATGCCTTTCCTGAGTTTTTGCAA
GAATACATCACTCAACATCACATCCAGGCCGTTGTCTGCTTTGGCGACACACGCCCTTATCACGTCATTGCAAAACGCAT
TGCAAACGAAAACCAAGCCAGTTTCTGGGCGTTTGAAGAAGGCTATTTCCGCCCCTACTACATCACCTTAGAAAAAGACG
GCGTCAACGCATTTTCCCCGTTGCCGCGCCGTGCCGACTTTTTTCTTGAACAATTCCCTAAGCTTGCCCAGCAAGAATAT
AAAGCGCCAACGCCGGTACACGGCGGTTTTACGCCCATGGCAAAAAACGCTATCCGTTACTATATCGAGTTGTTCCGCAA
TCCACGCAAATACCCCGACTACATCCACCACCGCGCACCCAATGCCGGCCATTACCTCAAACCGTGGTCGCTCTCCATCC
TCAAGCGTTTGAACTACTATATTGAAGACATCCAAATCGCCAAACGTGTGGAAGCAGGCAAATACGGCAAGTTTTTTATT
GTTCCCTTGCAGGTATTCAACGACAGCCAAGTCCGTATCCATTGCGACTTTCCCAGCGTCCGCAGCTTCCTGCTCCATGT
TTTGAGTTCATTTGCCGAACACGCGCCTGCCGATACCAACATCATCATCAAGCATCATCCTATGGACCGCGGCTTTATCG
ACTACTGGCGCGACATTAAACGCTTTATCAAAGAACACCCCGAACTCAAAGGCCGTGTGATTTATGTCCATGATGTCCCC
CTGCCCGTTTTCCTGCGCCACGGTCTCGGCATGGTTACCATCAACAGCACCAGCGGCCTGTCCGGACTGATTCACAATAT
GCCAGTTAAGGTTCTCGGCCGTGCCTATTATGATATTCCCGGCATTACTGACCAAAATACCTTGGCAGAATTTTGGAGTC
ATCCGACACCGCCTGACAAAGAGCTGTTCCATGCCTACCGAATGTACCACCTCAACGTGACCCAAATTAACGGCAACTTC
TACAGTCAGGTCTTTTTTCCTAACAAAAACACATCCGACTCTTCCACACCAACAACCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

38.579

94.033

0.363


Multiple sequence alignment