Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | IX88_RS00655 | Genome accession | NZ_CP009256 |
| Coordinates | 123844..124281 (-) | Length | 145 a.a. |
| NCBI ID | WP_005109337.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB31 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 118844..129281
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IX88_RS00630 (IX88_00640) | - | 119203..119586 (+) | 384 | WP_000090000.1 | RidA family protein | - |
| IX88_RS00635 (IX88_00645) | - | 119796..119990 (+) | 195 | WP_000289091.1 | bacterioferritin-associated ferredoxin | - |
| IX88_RS00640 (IX88_00650) | bfr | 120235..120699 (+) | 465 | WP_000678123.1 | bacterioferritin | - |
| IX88_RS00645 (IX88_00655) | - | 120740..122368 (-) | 1629 | WP_038405373.1 | PglL family O-oligosaccharyltransferase | - |
| IX88_RS00650 (IX88_00660) | - | 122482..123792 (-) | 1311 | WP_038405374.1 | O-antigen ligase | - |
| IX88_RS00655 (IX88_00665) | pilA | 123844..124281 (-) | 438 | WP_005109337.1 | pilin | Machinery gene |
| IX88_RS00660 (IX88_00670) | - | 124626..125186 (-) | 561 | WP_020753495.1 | TPM domain-containing protein | - |
| IX88_RS00665 (IX88_00675) | - | 125180..126262 (-) | 1083 | WP_001246384.1 | YgcG family protein | - |
| IX88_RS00670 (IX88_00680) | - | 126284..126874 (-) | 591 | WP_000846931.1 | LemA family protein | - |
| IX88_RS00675 (IX88_00685) | - | 127005..127892 (-) | 888 | WP_031999627.1 | metal-dependent hydrolase | - |
Sequence
Protein
Download Length: 145 a.a. Molecular weight: 15254.43 Da Isoelectric Point: 7.7725
>NTDB_id=127649 IX88_RS00655 WP_005109337.1 123844..124281(-) (pilA) [Acinetobacter baumannii strain AB31]
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTTIAENAGNGSADLTVGVPNFSKTENVDSI
TADKSTGAIAIKYTDKAKSLTLTLTPQDDGKSLSAGKVPTNQITWVCTVDKPDNAKYVPANCRGS
MNAQKGFTLIELMIVVAIIGILAAIAIPAYQDYIVRSKVTEGLNLASSYKTTIAENAGNGSADLTVGVPNFSKTENVDSI
TADKSTGAIAIKYTDKAKSLTLTLTPQDDGKSLSAGKVPTNQITWVCTVDKPDNAKYVPANCRGS
Nucleotide
Download Length: 438 bp
>NTDB_id=127649 IX88_RS00655 WP_005109337.1 123844..124281(-) (pilA) [Acinetobacter baumannii strain AB31]
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCGTATCAGGATTATATTGTTCGCTCAAAAGTAACAGAAGGTCTTAATTTGGCTTCATCATATAAAACGACTATTG
CTGAGAACGCAGGTAACGGTTCGGCGGATCTTACAGTAGGAGTTCCTAATTTTTCTAAGACAGAAAATGTTGATTCAATT
ACAGCGGATAAAAGTACTGGAGCTATTGCAATTAAATATACTGATAAGGCTAAAAGTTTAACTTTGACATTAACCCCTCA
AGATGACGGAAAATCTTTGTCAGCTGGTAAAGTGCCAACTAATCAGATTACTTGGGTGTGTACGGTAGATAAACCAGATA
ATGCTAAATATGTACCAGCTAATTGTCGTGGCTCATAA
ATGAATGCACAAAAAGGTTTTACGTTAATTGAACTCATGATCGTTGTAGCGATTATTGGTATTTTAGCAGCGATCGCGAT
TCCTGCGTATCAGGATTATATTGTTCGCTCAAAAGTAACAGAAGGTCTTAATTTGGCTTCATCATATAAAACGACTATTG
CTGAGAACGCAGGTAACGGTTCGGCGGATCTTACAGTAGGAGTTCCTAATTTTTCTAAGACAGAAAATGTTGATTCAATT
ACAGCGGATAAAAGTACTGGAGCTATTGCAATTAAATATACTGATAAGGCTAAAAGTTTAACTTTGACATTAACCCCTCA
AGATGACGGAAAATCTTTGTCAGCTGGTAAAGTGCCAACTAATCAGATTACTTGGGTGTGTACGGTAGATAAACCAGATA
ATGCTAAATATGTACCAGCTAATTGTCGTGGCTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Ralstonia pseudosolanacearum GMI1000 |
49.045 |
100 |
0.531 |
| comP | Acinetobacter baylyi ADP1 |
46.875 |
100 |
0.517 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
49.315 |
100 |
0.497 |
| pilA2 | Legionella pneumophila str. Paris |
49.315 |
100 |
0.497 |
| pilA | Pseudomonas aeruginosa PAK |
41.06 |
100 |
0.428 |
| pilA | Acinetobacter baumannii strain A118 |
43.662 |
97.931 |
0.428 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
40 |
100 |
0.428 |
| pilA/pilA1 | Eikenella corrodens VA1 |
39.103 |
100 |
0.421 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
37.107 |
100 |
0.407 |
| pilA | Haemophilus influenzae 86-028NP |
36.184 |
100 |
0.379 |