Detailed information NTG1170470

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: ACLV7W_RS09930
• Genome accession: NZ_OZ217346
• Coordinates: 2052884..2053318 (-)
• Length: 144 a.a.
• NCBI ID: WP_411865881.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis D22
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2047884..2058318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV7W_RS09895 (SMID22_20350)	rnpA	2048409..2048780 (-)	372	WP_411865876.1	ribonuclease P protein component	-
ACLV7W_RS09900 (SMID22_20360)	-	2048930..2050120 (-)	1191	WP_060627210.1	acetate kinase	-
ACLV7W_RS09905 (SMID22_20370)	comYH	2050170..2051123 (-)	954	WP_411865877.1	class I SAM-dependent methyltransferase	Machinery gene
ACLV7W_RS09910 (SMID22_20380)	-	2051184..2051771 (-)	588	WP_411865878.1	class I SAM-dependent methyltransferase	-
ACLV7W_RS09915 (SMID22_20390)	comGG/cglG	2051804..2052217 (-)	414	WP_322741434.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACLV7W_RS09920 (SMID22_20400)	comGF/cglF	2052195..2052656 (-)	462	WP_411865879.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACLV7W_RS09925 (SMID22_20410)	comGE/cglE	2052619..2052921 (-)	303	WP_411865880.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACLV7W_RS09930 (SMID22_20420)	comGD/cglD	2052884..2053318 (-)	435	WP_411865881.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACLV7W_RS09935 (SMID22_20430)	comGC/cglC	2053281..2053604 (-)	324	WP_000738641.1	comG operon protein ComGC	Machinery gene
ACLV7W_RS09940 (SMID22_20440)	comGB/cglB	2053606..2054622 (-)	1017	WP_411865944.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACLV7W_RS09945 (SMID22_20450)	comGA/cglA/cilD	2054570..2055511 (-)	942	WP_411865882.1	competence type IV pilus ATPase ComGA	Machinery gene
ACLV7W_RS09950 (SMID22_20460)	-	2055590..2055955 (-)	366	WP_000286409.1	DUF1033 family protein	-
ACLV7W_RS09955	-	2055982..2056206 (-)	225	WP_411865883.1	hypothetical protein	-
ACLV7W_RS09960 (SMID22_20480)	-	2056167..2057693 (+)	1527	WP_411865884.1	IS1182 family transposase	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15730.24 Da
• Isoelectric Point: 10.5562

>NTDB_id=1170470 ACLV7W_RS09930 WP_411865881.1 2052884..2053318(-) (comGD/cglD) [Streptococcus mitis isolate S. mitis D22]
MLNKIPVKPLQIKAFTMLESLLVLGLVSMIALGLSGSVQSTFAAVEEQIFFMEFEELYRGTQKRSVASQQKTSLNLDGQT
ISNGSQKLTVPKGIQAPSGQSITFDRAGGNSSLAKIEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1170470 ACLV7W_RS09930 WP_411865881.1 2052884..2053318(-) (comGD/cglD) [Streptococcus mitis isolate S. mitis D22]
ATGCTAAACAAAATACCAGTCAAACCGTTGCAGATTAAGGCCTTTACAATGCTTGAAAGTCTCTTGGTTTTGGGACTTGT
AAGTATGATTGCCTTGGGCTTGTCCGGTTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGGAACCCAAAAACGCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAACTTAGATGGGCAGACT
ATCAGTAACGGCAGTCAAAAGTTGACAGTTCCTAAAGGCATTCAAGCACCATCAGGCCAAAGTATTACATTTGACCGAGC
TGGGGGAAATTCGTCCCTGGCTAAGATTGAATTTCAGACCAGTAAAGGAGCAATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	95.833	100	0.958
comGD/cglD	Streptococcus mitis SK321	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae Rx1	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae D39	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae R6	95.489	92.361	0.882
comGD/cglD	Streptococcus pneumoniae TIGR4	94.737	92.361	0.875
comYD	Streptococcus gordonii str. Challis substr. CH1	55.97	93.056	0.521
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437