Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   ACLV7W_RS09915 Genome accession   NZ_OZ217346
Coordinates   2051804..2052217 (-) Length   137 a.a.
NCBI ID   WP_322741434.1    Uniprot ID   A0A6I1UHE5
Organism   Streptococcus mitis isolate S. mitis D22     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2046804..2057217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7W_RS09890 (SMID22_20340) - 2047610..2048434 (-) 825 WP_411865875.1 membrane protein insertase YidC -
  ACLV7W_RS09895 (SMID22_20350) rnpA 2048409..2048780 (-) 372 WP_411865876.1 ribonuclease P protein component -
  ACLV7W_RS09900 (SMID22_20360) - 2048930..2050120 (-) 1191 WP_060627210.1 acetate kinase -
  ACLV7W_RS09905 (SMID22_20370) comYH 2050170..2051123 (-) 954 WP_411865877.1 class I SAM-dependent methyltransferase Machinery gene
  ACLV7W_RS09910 (SMID22_20380) - 2051184..2051771 (-) 588 WP_411865878.1 class I SAM-dependent methyltransferase -
  ACLV7W_RS09915 (SMID22_20390) comGG/cglG 2051804..2052217 (-) 414 WP_322741434.1 competence type IV pilus minor pilin ComGG Machinery gene
  ACLV7W_RS09920 (SMID22_20400) comGF/cglF 2052195..2052656 (-) 462 WP_411865879.1 competence type IV pilus minor pilin ComGF Machinery gene
  ACLV7W_RS09925 (SMID22_20410) comGE/cglE 2052619..2052921 (-) 303 WP_411865880.1 competence type IV pilus minor pilin ComGE Machinery gene
  ACLV7W_RS09930 (SMID22_20420) comGD/cglD 2052884..2053318 (-) 435 WP_411865881.1 competence type IV pilus minor pilin ComGD Machinery gene
  ACLV7W_RS09935 (SMID22_20430) comGC/cglC 2053281..2053604 (-) 324 WP_000738641.1 comG operon protein ComGC Machinery gene
  ACLV7W_RS09940 (SMID22_20440) comGB/cglB 2053606..2054622 (-) 1017 WP_411865944.1 competence type IV pilus assembly protein ComGB Machinery gene
  ACLV7W_RS09945 (SMID22_20450) comGA/cglA/cilD 2054570..2055511 (-) 942 WP_411865882.1 competence type IV pilus ATPase ComGA Machinery gene
  ACLV7W_RS09950 (SMID22_20460) - 2055590..2055955 (-) 366 WP_000286409.1 DUF1033 family protein -
  ACLV7W_RS09955 - 2055982..2056206 (-) 225 WP_411865883.1 hypothetical protein -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15789.19 Da        Isoelectric Point: 10.3213

>NTDB_id=1170467 ACLV7W_RS09915 WP_322741434.1 2051804..2052217(-) (comGG/cglG) [Streptococcus mitis isolate S. mitis D22]
MWKKKKVKAGVLLYAVTISAIFSLLLQFYLNRQVAHYQDYAVNKEKLIAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKK
TGLVTTVRTPKSQYEFLFPSVKIKEEKTDKKEKVVTDSSNQAEKKKSEEKSEKKENS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=1170467 ACLV7W_RS09915 WP_322741434.1 2051804..2052217(-) (comGG/cglG) [Streptococcus mitis isolate S. mitis D22]
GTGTGGAAAAAGAAAAAAGTTAAGGCAGGAGTTCTCCTCTATGCAGTCACCATTTCAGCCATTTTCAGCCTTTTATTGCA
GTTCTATTTGAACCGACAAGTCGCCCACTATCAAGACTATGCTGTAAATAAAGAAAAGTTAATCGCTTTTGCCATGGCTA
AACGAACCAAGGATAAAGCCGAGCAAGAAAGTGGGGAGCAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACTGGCTTGGTGACGACGGTTCGTACGCCTAAGAGTCAATATGAGTTCCTATTTCCTTCAGTCAAAATCAAAGAAGAGAA
AACGGATAAAAAGGAAAAGGTAGTGACTGATTCAAGTAATCAAGCGGAAAAGAAAAAATCAGAAGAGAAGTCTGAAAAGA
AAGAGAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I1UHE5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

90.511

100

0.905

  comGG/cglG Streptococcus mitis NCTC 12261

91.803

89.051

0.818

  comGG/cglG Streptococcus pneumoniae D39

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae TIGR4

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae R6

91.453

85.401

0.781

  comGG/cglG Streptococcus pneumoniae Rx1

91.453

85.401

0.781

  comYG Streptococcus mutans UA140

37.778

98.54

0.372

  comYG Streptococcus mutans UA159

37.778

98.54

0.372


Multiple sequence alignment