Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACLV7W_RS09905 | Genome accession | NZ_OZ217346 |
| Coordinates | 2050170..2051123 (-) | Length | 317 a.a. |
| NCBI ID | WP_411865877.1 | Uniprot ID | - |
| Organism | Streptococcus mitis isolate S. mitis D22 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2045170..2056123
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACLV7W_RS09880 (SMID22_20320) | - | 2045929..2046552 (-) | 624 | WP_411865873.1 | HI_0552 family protein | - |
| ACLV7W_RS09885 (SMID22_20330) | jag | 2046603..2047592 (-) | 990 | WP_411865874.1 | RNA-binding cell elongation regulator Jag/EloR | - |
| ACLV7W_RS09890 (SMID22_20340) | - | 2047610..2048434 (-) | 825 | WP_411865875.1 | membrane protein insertase YidC | - |
| ACLV7W_RS09895 (SMID22_20350) | rnpA | 2048409..2048780 (-) | 372 | WP_411865876.1 | ribonuclease P protein component | - |
| ACLV7W_RS09900 (SMID22_20360) | - | 2048930..2050120 (-) | 1191 | WP_060627210.1 | acetate kinase | - |
| ACLV7W_RS09905 (SMID22_20370) | comYH | 2050170..2051123 (-) | 954 | WP_411865877.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACLV7W_RS09910 (SMID22_20380) | - | 2051184..2051771 (-) | 588 | WP_411865878.1 | class I SAM-dependent methyltransferase | - |
| ACLV7W_RS09915 (SMID22_20390) | comGG/cglG | 2051804..2052217 (-) | 414 | WP_322741434.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| ACLV7W_RS09920 (SMID22_20400) | comGF/cglF | 2052195..2052656 (-) | 462 | WP_411865879.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACLV7W_RS09925 (SMID22_20410) | comGE/cglE | 2052619..2052921 (-) | 303 | WP_411865880.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACLV7W_RS09930 (SMID22_20420) | comGD/cglD | 2052884..2053318 (-) | 435 | WP_411865881.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACLV7W_RS09935 (SMID22_20430) | comGC/cglC | 2053281..2053604 (-) | 324 | WP_000738641.1 | comG operon protein ComGC | Machinery gene |
| ACLV7W_RS09940 (SMID22_20440) | comGB/cglB | 2053606..2054622 (-) | 1017 | WP_411865944.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACLV7W_RS09945 (SMID22_20450) | comGA/cglA/cilD | 2054570..2055511 (-) | 942 | WP_411865882.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACLV7W_RS09950 (SMID22_20460) | - | 2055590..2055955 (-) | 366 | WP_000286409.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35665.87 Da Isoelectric Point: 4.3417
>NTDB_id=1170466 ACLV7W_RS09905 WP_411865877.1 2050170..2051123(-) (comYH) [Streptococcus mitis isolate S. mitis D22]
MDFEKIEQAYTYLLENVQIIQSDLTTNFYDALVEQNSIYLDGETELNQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASRQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEANLVAIISLPENLFANAKQSKTIFILQKKSEIAGEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
MDFEKIEQAYTYLLENVQIIQSDLTTNFYDALVEQNSIYLDGETELNQVKENNQALKRLALRKEEWLKTYQFLLMKAGQT
EPLQANHQFTPDAIALLLVFIVEELFKEEEITILEMGSGMGILGATFLTSLAKKVDYLGMEVDDLLIDLAASMADVIGLQ
AGFVQGDAVRPQMLKESDVVISDLPVGYYPDDAVASRHQVASRQEHTYAHHLLMEQGLKYLKSDGYAIFLAPSDLLTSPQ
SDLLKGWLKEEANLVAIISLPENLFANAKQSKTIFILQKKSEIAGEPFVYPLASLQDASVLMKFKENFQKWTQGTEI
Nucleotide
Download Length: 954 bp
>NTDB_id=1170466 ACLV7W_RS09905 WP_411865877.1 2050170..2051123(-) (comYH) [Streptococcus mitis isolate S. mitis D22]
ATGGATTTTGAAAAAATTGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAATCATCCAAAGTGATTTGACGACCAA
TTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAGACTGAGCTAAATCAGGTAAAAGAGAACAATC
AAGCCCTTAAGCGTTTAGCGCTTCGCAAGGAAGAATGGCTCAAGACCTACCAATTTCTCTTGATGAAGGCAGGGCAGACA
GAGCCCCTACAGGCCAATCATCAGTTTACACCAGATGCCATTGCTTTACTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATTACGATCCTCGAAATGGGGTCTGGGATGGGGATTCTGGGCGCTACTTTCTTGACCTCGCTGGCTAAAA
AGGTGGATTACTTGGGAATGGAAGTAGATGATTTGTTGATTGATTTGGCAGCTAGTATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGCGACTTGCCTGTCGG
ATATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGACAAGAACATACCTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTATCTCAAATCAGATGGCTATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAG
AGTGATTTATTGAAAGGCTGGTTGAAAGAGGAGGCAAATCTAGTTGCCATAATCAGTCTCCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCCAAGACTATTTTTATCTTACAAAAGAAAAGTGAAATAGCAGGAGAGCCTTTTGTTTATCCACTTGCAA
GCCTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
ATGGATTTTGAAAAAATTGAACAAGCTTATACGTATTTACTAGAGAATGTCCAAATCATCCAAAGTGATTTGACGACCAA
TTTTTATGACGCCTTGGTGGAGCAAAACAGCATCTATCTGGATGGTGAGACTGAGCTAAATCAGGTAAAAGAGAACAATC
AAGCCCTTAAGCGTTTAGCGCTTCGCAAGGAAGAATGGCTCAAGACCTACCAATTTCTCTTGATGAAGGCAGGGCAGACA
GAGCCCCTACAGGCCAATCATCAGTTTACACCAGATGCCATTGCTTTACTTTTGGTGTTTATTGTGGAAGAGCTGTTTAA
AGAGGAGGAAATTACGATCCTCGAAATGGGGTCTGGGATGGGGATTCTGGGCGCTACTTTCTTGACCTCGCTGGCTAAAA
AGGTGGATTACTTGGGAATGGAAGTAGATGATTTGTTGATTGATTTGGCAGCTAGTATGGCAGATGTAATTGGTTTGCAG
GCTGGCTTTGTCCAAGGAGATGCCGTTCGTCCACAAATGCTCAAAGAAAGCGATGTGGTCATCAGCGACTTGCCTGTCGG
ATATTATCCTGATGATGCCGTTGCGTCGCGCCATCAAGTTGCTTCTAGACAAGAACATACCTACGCCCATCACTTGCTCA
TGGAACAAGGACTTAAGTATCTCAAATCAGATGGCTATGCTATTTTTCTAGCTCCGAGTGATTTGTTGACCAGTCCTCAG
AGTGATTTATTGAAAGGCTGGTTGAAAGAGGAGGCAAATCTAGTTGCCATAATCAGTCTCCCTGAAAATCTCTTTGCTAA
TGCTAAACAATCCAAGACTATTTTTATCTTACAAAAGAAAAGTGAAATAGCAGGAGAGCCTTTTGTTTATCCACTTGCAA
GCCTGCAAGATGCAAGTGTTTTAATGAAATTTAAAGAAAATTTTCAAAAATGGACTCAAGGTACTGAAATATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
55.272 |
98.738 |
0.546 |
| comYH | Streptococcus mutans UA159 |
54.952 |
98.738 |
0.543 |