Detailed information NTG1170104

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: ACLV65_RS01880
• Genome accession: NZ_OZ217342
• Coordinates: 370916..371311 (+)
• Length: 131 a.a.
• NCBI ID: WP_069287338.1
• Uniprot ID: -
• Organism: Streptococcus mitis isolate S. mitis B22
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 365916..376311

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLV65_RS01835 (SMIB22_03550)	-	366349..366852 (+)	504	WP_411864381.1	phosphatase PAP2 family protein	-
ACLV65_RS01840 (SMIB22_03560)	-	366966..367412 (+)	447	WP_411864382.1	LytTR family DNA-binding domain-containing protein	-
ACLV65_RS01845 (SMIB22_03570)	-	367417..368091 (+)	675	WP_411864383.1	hypothetical protein	-
ACLV65_RS01850 (SMIB22_03580)	-	368334..368531 (+)	198	Protein_331	N-acetylmuramoyl-L-alanine amidase family protein	-
ACLV65_RS01855	-	368556..368687 (-)	132	WP_033679736.1	hypothetical protein	-
ACLV65_RS01860 (SMIB22_03590)	-	368781..369080 (+)	300	WP_050202793.1	DUF4651 domain-containing protein	-
ACLV65_RS01865 (SMIB22_03600)	-	369077..369394 (+)	318	WP_000615777.1	thioredoxin family protein	-
ACLV65_RS01870 (SMIB22_03610)	ytpR	369410..370036 (+)	627	WP_140224430.1	YtpR family tRNA-binding protein	-
ACLV65_RS01875 (SMIB22_03620)	-	370078..370839 (+)	762	WP_411864384.1	SDR family NAD(P)-dependent oxidoreductase	-
ACLV65_RS01880 (SMIB22_03630)	ssbB/cilA	370916..371311 (+)	396	WP_069287338.1	single-stranded DNA-binding protein	Machinery gene
ACLV65_RS01885 (SMIB22_03640)	groES	371467..371751 (+)	285	WP_311519189.1	co-chaperone GroES	-
ACLV65_RS01890 (SMIB22_03650)	groL	371767..373389 (+)	1623	WP_000031579.1	chaperonin GroEL	-
ACLV65_RS01895 (SMIB22_03660)	-	373528..374295 (+)	768	WP_020900987.1	epoxyqueuosine reductase QueH	-
ACLV65_RS01900 (SMIB22_03670)	-	374366..374899 (-)	534	WP_000775316.1	DUF402 domain-containing protein	-
ACLV65_RS01905 (SMIB22_03680)	recX	374988..375764 (-)	777	WP_411864385.1	recombination regulator RecX	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14907.85 Da
• Isoelectric Point: 5.9409

>NTDB_id=1170104 ACLV65_RS01880 WP_069287338.1 370916..371311(+) (ssbB/cilA) [Streptococcus mitis isolate S. mitis B22]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQINYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1170104 ACLV65_RS01880 WP_069287338.1 370916..371311(+) (ssbB/cilA) [Streptococcus mitis isolate S. mitis B22]
ATGTATAATAAAGTTATCATGATTGGACGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGCGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAGACTTTGGCAAGCTACGCAACCAAAGGTAGTCTTATTTCTGTGGATGGAGAATTACGTACCCGT
CGTTTTGAGAAAAATGGTCAGATTAACTATGTGACTGAAGTACTTGTTACTGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCGGATTTGGTCTTGGAAGAGGAAGAACTACCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae TIGR4	98.473	100	0.985
ssbB/cilA	Streptococcus mitis SK321	97.71	100	0.977
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	74.809	100	0.748
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.229	100	0.702
ssbB	Lactococcus lactis subsp. cremoris KW2	59.821	85.496	0.511
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405