Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | QML75_RS05880 | Genome accession | NZ_OX346408 |
| Coordinates | 1190199..1190627 (+) | Length | 142 a.a. |
| NCBI ID | WP_047338779.1 | Uniprot ID | A0A1Y4QXL8 |
| Organism | Enterococcus cecorum isolate CIRMBP-1302 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1185199..1195627
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QML75_RS05860 (CIRMBP1302_01169) | iscB | 1185540..1186814 (+) | 1275 | WP_047341038.1 | RNA-guided endonuclease IscB | - |
| QML75_RS05865 (CIRMBP1302_01170) | - | 1186896..1187834 (+) | 939 | WP_047242094.1 | DUF1002 domain-containing protein | - |
| QML75_RS05870 | - | 1188116..1188247 (+) | 132 | WP_143349847.1 | LPXTG cell wall anchor domain-containing protein | - |
| QML75_RS05875 (CIRMBP1302_01171) | - | 1188498..1190144 (+) | 1647 | WP_282007843.1 | hypothetical protein | - |
| QML75_RS05880 (CIRMBP1302_01172) | ssbA | 1190199..1190627 (+) | 429 | WP_047338779.1 | single-stranded DNA-binding protein | Machinery gene |
| QML75_RS05885 (CIRMBP1302_01173) | - | 1190642..1190797 (+) | 156 | WP_162607287.1 | hypothetical protein | - |
| QML75_RS05890 (CIRMBP1302_01174) | - | 1190826..1191188 (+) | 363 | WP_047338778.1 | hypothetical protein | - |
| QML75_RS05895 (CIRMBP1302_01175) | - | 1191185..1191697 (+) | 513 | WP_143349855.1 | thioredoxin | - |
| QML75_RS05900 (CIRMBP1302_01176) | - | 1191708..1192166 (+) | 459 | WP_087215116.1 | hypothetical protein | - |
| QML75_RS05905 (CIRMBP1302_01177) | - | 1192184..1192546 (+) | 363 | WP_087215119.1 | hypothetical protein | - |
| QML75_RS05910 (CIRMBP1302_01178) | - | 1192568..1192705 (+) | 138 | WP_171300056.1 | hypothetical protein | - |
| QML75_RS05915 (CIRMBP1302_01179) | - | 1192767..1192934 (+) | 168 | WP_162607288.1 | hypothetical protein | - |
| QML75_RS05920 (CIRMBP1302_01180) | - | 1192927..1193415 (+) | 489 | WP_171313717.1 | hypothetical protein | - |
| QML75_RS05925 (CIRMBP1302_01181) | - | 1193434..1193652 (+) | 219 | WP_114975447.1 | hypothetical protein | - |
| QML75_RS05930 (CIRMBP1302_01182) | - | 1193671..1194078 (+) | 408 | WP_087215128.1 | hypothetical protein | - |
| QML75_RS05935 (CIRMBP1302_01183) | - | 1194059..1194397 (+) | 339 | WP_087215132.1 | hypothetical protein | - |
| QML75_RS05940 (CIRMBP1302_01184) | - | 1194399..1194602 (+) | 204 | WP_087215135.1 | hypothetical protein | - |
| QML75_RS05945 (CIRMBP1302_01185) | - | 1194645..1195004 (+) | 360 | WP_282007844.1 | hypothetical protein | - |
| QML75_RS05950 (CIRMBP1302_01186) | - | 1195060..1195530 (+) | 471 | WP_241147049.1 | class I SAM-dependent methyltransferase | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 15949.81 Da Isoelectric Point: 4.5692
>NTDB_id=1155205 QML75_RS05880 WP_047338779.1 1190199..1190627(+) (ssbA) [Enterococcus cecorum isolate CIRMBP-1302]
MINSVSLTGRLIREVDLRYSKTGKPVAQFTLAVNRKYPDQNGERQADFIRCIIWGKSAEALEKYTQKGSLIGVEGRIQTR
NYTNSQGKRVYLTEVVAQDFVFLESKGTAESRNGAGIATDYEDDLPDLDMGVEEFSDDDLPF
MINSVSLTGRLIREVDLRYSKTGKPVAQFTLAVNRKYPDQNGERQADFIRCIIWGKSAEALEKYTQKGSLIGVEGRIQTR
NYTNSQGKRVYLTEVVAQDFVFLESKGTAESRNGAGIATDYEDDLPDLDMGVEEFSDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=1155205 QML75_RS05880 WP_047338779.1 1190199..1190627(+) (ssbA) [Enterococcus cecorum isolate CIRMBP-1302]
ATGATCAATTCAGTCAGTTTAACAGGAAGACTAATTAGGGAGGTGGATTTGAGATATTCCAAAACAGGAAAGCCAGTTGC
TCAATTTACATTAGCAGTCAATCGTAAGTACCCAGATCAAAATGGCGAACGACAAGCAGATTTTATTCGTTGTATTATCT
GGGGCAAGAGTGCTGAAGCTTTAGAAAAGTATACACAAAAAGGTTCATTGATTGGTGTAGAAGGACGTATTCAGACACGT
AATTATACGAACAGTCAAGGAAAGAGAGTGTATTTAACAGAAGTTGTTGCTCAAGATTTTGTGTTTTTAGAATCAAAAGG
AACTGCTGAAAGTCGAAATGGTGCAGGAATCGCAACGGATTACGAGGACGATTTACCAGACTTAGATATGGGTGTAGAAG
AGTTTTCAGATGATGATTTACCGTTTTAA
ATGATCAATTCAGTCAGTTTAACAGGAAGACTAATTAGGGAGGTGGATTTGAGATATTCCAAAACAGGAAAGCCAGTTGC
TCAATTTACATTAGCAGTCAATCGTAAGTACCCAGATCAAAATGGCGAACGACAAGCAGATTTTATTCGTTGTATTATCT
GGGGCAAGAGTGCTGAAGCTTTAGAAAAGTATACACAAAAAGGTTCATTGATTGGTGTAGAAGGACGTATTCAGACACGT
AATTATACGAACAGTCAAGGAAAGAGAGTGTATTTAACAGAAGTTGTTGCTCAAGATTTTGTGTTTTTAGAATCAAAAGG
AACTGCTGAAAGTCGAAATGGTGCAGGAATCGCAACGGATTACGAGGACGATTTACCAGACTTAGATATGGGTGTAGAAG
AGTTTTCAGATGATGATTTACCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
40.116 |
100 |
0.486 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.839 |
87.324 |
0.479 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
44.056 |
100 |
0.444 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
44.056 |
100 |
0.444 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
43.357 |
100 |
0.437 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
43.357 |
100 |
0.437 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
43.357 |
100 |
0.437 |
| ssbB/cilA | Streptococcus mitis SK321 |
41.958 |
100 |
0.423 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
44.275 |
92.254 |
0.408 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
74.648 |
0.38 |
| ssbA | Streptococcus mutans UA159 |
37.324 |
100 |
0.373 |