Detailed information NTG1154358

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AD178_RS09945
• Genome accession: NZ_OX244288
• Coordinates: 1923764..1924168 (-)
• Length: 134 a.a.
• NCBI ID: WP_000588022.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PT8105 isolate 2RLC4
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1918764..1929168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AD178_RS09905 (SAMEA1463109_01999)	rnpA	1919178..1919549 (-)	372	WP_000739246.1	ribonuclease P protein component	-
AD178_RS09910	-	1919566..1919697 (-)	132	WP_000768904.1	hypothetical protein	-
AD178_RS09915 (SAMEA1463109_02000)	-	1919698..1920888 (-)	1191	WP_000167757.1	acetate kinase	-
AD178_RS09920 (SAMEA1463109_02001)	comYH	1920939..1921892 (-)	954	WP_000345136.1	class I SAM-dependent methyltransferase	Machinery gene
AD178_RS09925	-	1921953..1922547 (-)	595	Protein_1936	methyltransferase domain-containing protein	-
AD178_RS09930 (SAMEA1463109_02004)	comGG/cglG	1922684..1923097 (-)	414	WP_000265622.1	competence type IV pilus minor pilin ComGG	Machinery gene
AD178_RS09935 (SAMEA1463109_02005)	comGF/cglF	1923075..1923536 (-)	462	WP_000250525.1	competence type IV pilus minor pilin ComGF	Machinery gene
AD178_RS09940 (SAMEA1463109_02006)	comGE/cglE	1923499..1923801 (-)	303	WP_188109891.1	competence type IV pilus minor pilin ComGE	Machinery gene
AD178_RS09945 (SAMEA1463109_02007)	comGD/cglD	1923764..1924168 (-)	405	WP_000588022.1	competence type IV pilus minor pilin ComGD	Machinery gene
AD178_RS09950 (SAMEA1463109_02008)	comGC/cglC	1924161..1924487 (-)	327	WP_000738634.1	comG operon protein ComGC	Machinery gene
AD178_RS09955 (SAMEA1463109_02009)	comGB/cglB	1924489..1925505 (-)	1017	WP_074017570.1	competence type IV pilus assembly protein ComGB	Machinery gene
AD178_RS09960 (SAMEA1463109_02010)	comGA/cglA/cilD	1925453..1926394 (-)	942	WP_000249549.1	competence type IV pilus ATPase ComGA	Machinery gene
AD178_RS09965 (SAMEA1463109_02011)	-	1926470..1926835 (-)	366	WP_000286415.1	DUF1033 family protein	-
AD178_RS09970 (SAMEA1463109_02012)	-	1926986..1928044 (-)	1059	WP_000649466.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 134 a.a.
• Molecular weight: 14696.86 Da
• Isoelectric Point: 10.0319

>NTDB_id=1154358 AD178_RS09945 WP_000588022.1 1923764..1924168(-) (comGD/cglD) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
MIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQTLSNGSQKLTV
PKGIQAPSDQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 405 bp

>NTDB_id=1154358 AD178_RS09945 WP_000588022.1 1923764..1924168(-) (comGD/cglD) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
ATGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGTCTTGTGAGTATCCTTGCCTTGGGCTTATCCGGCTC
TGTCCAGTCCACTTTTGCAGCAGTAGAGGAGCAGATTTTCTTTATGGAGTTTGAAGAACTCTATCGGGAAACCCAAAAAC
GCAGTGTAGCCAGTCAGCAAAAGACTAGTCTAAATTTAGATGGGCAGACGCTTAGCAATGGCAGTCAAAAGTTGACAGTC
CCTAAAGGAATTCAGGCCCCATCAGATCAAAGTATTACATTTGACCGTGCTGGGGGCAATTCGTCCCTGGCTAAGGTTGA
ATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATGGAAAAATTAAACGCATTAAGGAAACAAAAA
ATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus pneumoniae TIGR4	97.761	100	0.978
comGD/cglD	Streptococcus pneumoniae Rx1	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae D39	97.015	100	0.97
comGD/cglD	Streptococcus pneumoniae R6	97.015	100	0.97
comGD/cglD	Streptococcus mitis SK321	96.269	100	0.963
comGD/cglD	Streptococcus mitis NCTC 12261	96.992	99.254	0.963
comYD	Streptococcus gordonii str. Challis substr. CH1	58.268	94.776	0.552
comYD	Streptococcus mutans UA140	49.219	95.522	0.47
comYD	Streptococcus mutans UA159	49.219	95.522	0.47