Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | CKV96_RS09585 | Genome accession | NZ_LT906476 |
| Coordinates | 2101673..2102086 (-) | Length | 137 a.a. |
| NCBI ID | WP_027225147.1 | Uniprot ID | - |
| Organism | Legionella pneumophila strain NCTC11286 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2096673..2107086
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CKV96_RS09575 (SAMEA4040027_01897) | letS | 2097603..2100335 (+) | 2733 | WP_027225145.1 | two-component system sensor histidine kinase LetS | Regulator |
| CKV96_RS09580 (SAMEA4040027_01898) | - | 2100432..2101676 (+) | 1245 | WP_027225146.1 | 6-phosphofructokinase | - |
| CKV96_RS09585 (SAMEA4040027_01899) | pilA2 | 2101673..2102086 (-) | 414 | WP_027225147.1 | pilin | Machinery gene |
| CKV96_RS09590 (SAMEA4040027_01900) | pilA2 | 2102279..2102689 (-) | 411 | WP_011214168.1 | pilin | Machinery gene |
| CKV96_RS09595 (SAMEA4040027_01901) | - | 2102992..2103309 (+) | 318 | WP_027225148.1 | BolA family protein | - |
| CKV96_RS09600 (SAMEA4040027_01902) | - | 2103384..2104805 (+) | 1422 | WP_027225149.1 | APC family permease | - |
| CKV96_RS09605 (SAMEA4040027_01903) | - | 2104903..2106333 (-) | 1431 | WP_027225150.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14475.82 Da Isoelectric Point: 6.2016
>NTDB_id=1147972 CKV96_RS09585 WP_027225147.1 2101673..2102086(-) (pilA2) [Legionella pneumophila strain NCTC11286]
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILVAIAIPAYQDYTIRARVVEGLEMASAAKLAVVETSLIDNTLPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=1147972 CKV96_RS09585 WP_027225147.1 2101673..2102086(-) (pilA2) [Legionella pneumophila strain NCTC11286]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCCGCTATACTTGGGATTCTGGTTGCCATCGCAATTCC
AGCCTATCAGGACTATACCATCAGAGCACGGGTGGTTGAAGGATTGGAAATGGCTTCGGCCGCTAAATTAGCTGTTGTTG
AAACGAGTTTAATTGATAACACTTTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCAGCCCCAACAATTAATGTG
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACTGCAAACGCAGGTAATGGCACTATCACAATGGT
TCCCACCCTGGATGCTACTAACAGAATACTCACTTGGGATTGCACTGGCGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
73.723 |
100 |
0.737 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
72.993 |
100 |
0.73 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
46.012 |
100 |
0.547 |
| comP | Acinetobacter baylyi ADP1 |
46.207 |
100 |
0.489 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.184 |
100 |
0.401 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
37.41 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.899 |
100 |
0.38 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.899 |
100 |
0.38 |