Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BUC38_RS00910 | Genome accession | NZ_LT671674 |
| Coordinates | 158017..158412 (+) | Length | 131 a.a. |
| NCBI ID | WP_011921737.1 | Uniprot ID | A0A0Z9FQS6 |
| Organism | Streptococcus suis strain LS9N | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 153017..163412
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BUC38_RS00885 | - | 153042..153326 (+) | 285 | WP_044682592.1 | DUF4651 domain-containing protein | - |
| BUC38_RS00890 | - | 153323..153643 (+) | 321 | WP_044690503.1 | thioredoxin family protein | - |
| BUC38_RS00895 | - | 153688..154644 (+) | 957 | WP_044690505.1 | DUF1002 domain-containing protein | - |
| BUC38_RS00900 | ytpR | 154663..155286 (+) | 624 | WP_044690507.1 | YtpR family tRNA-binding protein | - |
| BUC38_RS00905 | - | 155423..157954 (+) | 2532 | WP_052503071.1 | LPXTG cell wall anchor domain-containing protein | - |
| BUC38_RS00910 | ssbA | 158017..158412 (+) | 396 | WP_011921737.1 | single-stranded DNA-binding protein | Machinery gene |
| BUC38_RS00915 | - | 158529..158774 (-) | 246 | WP_044690455.1 | hypothetical protein | - |
| BUC38_RS00920 | groES | 158970..159251 (+) | 282 | WP_014637330.1 | co-chaperone GroES | - |
| BUC38_RS00925 | groL | 159263..160885 (+) | 1623 | WP_044690453.1 | chaperonin GroEL | - |
| BUC38_RS00930 | rpsL | 161116..161529 (+) | 414 | WP_024375740.1 | 30S ribosomal protein S12 | - |
| BUC38_RS00935 | rpsG | 161546..162016 (+) | 471 | WP_002940031.1 | 30S ribosomal protein S7 | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14868.73 Da Isoelectric Point: 5.0026
>NTDB_id=1145979 BUC38_RS00910 WP_011921737.1 158017..158412(+) (ssbA) [Streptococcus suis strain LS9N]
MYNKTILIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKTENGEREADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTR
KYEKDGSNHYVTEILGQSFQLLESRAQRAMRENNTGDDLADLVLEEEELPF
MYNKTILIGRLTAQPELTQTPTGKNLTRVTVAVNRRFKTENGEREADFLNVIFWGKLAETLVSYGSKGSLISIDGELRTR
KYEKDGSNHYVTEILGQSFQLLESRAQRAMRENNTGDDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1145979 BUC38_RS00910 WP_011921737.1 158017..158412(+) (ssbA) [Streptococcus suis strain LS9N]
ATGTATAATAAAACAATTTTAATCGGTCGCTTGACGGCCCAACCTGAACTCACTCAAACACCAACTGGCAAAAATTTGAC
TCGTGTAACTGTCGCAGTCAATCGCCGATTTAAGACAGAAAATGGTGAGCGTGAAGCAGATTTTCTCAATGTTATTTTCT
GGGGCAAACTGGCGGAGACACTTGTTTCTTATGGCAGCAAGGGCAGTCTGATTTCTATTGATGGTGAGTTGCGAACGCGA
AAATACGAAAAAGACGGCAGCAACCATTATGTGACGGAAATCTTAGGACAATCGTTCCAGTTGCTCGAAAGTCGTGCCCA
ACGAGCCATGCGTGAAAACAATACTGGTGATGACCTAGCTGACTTGGTCTTGGAAGAGGAAGAATTGCCGTTTTAG
ATGTATAATAAAACAATTTTAATCGGTCGCTTGACGGCCCAACCTGAACTCACTCAAACACCAACTGGCAAAAATTTGAC
TCGTGTAACTGTCGCAGTCAATCGCCGATTTAAGACAGAAAATGGTGAGCGTGAAGCAGATTTTCTCAATGTTATTTTCT
GGGGCAAACTGGCGGAGACACTTGTTTCTTATGGCAGCAAGGGCAGTCTGATTTCTATTGATGGTGAGTTGCGAACGCGA
AAATACGAAAAAGACGGCAGCAACCATTATGTGACGGAAATCTTAGGACAATCGTTCCAGTTGCTCGAAAGTCGTGCCCA
ACGAGCCATGCGTGAAAACAATACTGGTGATGACCTAGCTGACTTGGTCTTGGAAGAGGAAGAATTGCCGTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
76.336 |
100 |
0.763 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
75.573 |
100 |
0.756 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
71.756 |
100 |
0.718 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
70.992 |
100 |
0.71 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
70.992 |
100 |
0.71 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
70.992 |
100 |
0.71 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
70.992 |
100 |
0.71 |
| ssbB/cilA | Streptococcus mitis SK321 |
70.992 |
100 |
0.71 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
64.286 |
85.496 |
0.55 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
44.248 |
86.26 |
0.382 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
46.226 |
80.916 |
0.374 |