Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C7S05_RS13890 | Genome accession | NZ_LT591897 |
| Coordinates | 2168076..2168387 (-) | Length | 103 a.a. |
| NCBI ID | WP_106278844.1 | Uniprot ID | A0AB74EHX5 |
| Organism | Neisseria gonorrhoeae strain WHO F | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2163076..2173387
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7S05_RS12705 (WHOF_02390C) | msrAB | 2163134..2164702 (-) | 1569 | WP_003696503.1 | bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB | - |
| C7S05_RS12710 (WHOF_02391) | pilA | 2164848..2166101 (+) | 1254 | WP_003687004.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| C7S05_RS12715 (WHOF_02392C) | - | 2166368..2167069 (-) | 702 | WP_134908983.1 | opacity family porin | - |
| C7S05_RS15160 (WHOF_02393C) | - | 2167729..2168094 (-) | 366 | WP_181815953.1 | pilin | - |
| C7S05_RS13890 (WHOF_02394C) | pilE | 2168076..2168387 (-) | 312 | WP_106278844.1 | pilin | Machinery gene |
| C7S05_RS12730 | - | 2168756..2168899 (-) | 144 | WP_047924256.1 | hypothetical protein | - |
| C7S05_RS12735 | - | 2169004..2169084 (-) | 81 | Protein_2220 | pilin | - |
| C7S05_RS12740 (WHOF_02395C) | - | 2169202..2169609 (-) | 408 | Protein_2221 | pilin | - |
| C7S05_RS12745 (WHOF_02396C) | lpxC | 2169738..2170661 (-) | 924 | WP_003687007.1 | UDP-3-O-acyl-N-acetylglucosamine deacetylase | - |
| C7S05_RS12755 (WHOF_02397C) | - | 2171236..2171625 (-) | 390 | Protein_2223 | pilin | - |
| C7S05_RS12760 (WHOF_02398C) | - | 2171981..2172937 (-) | 957 | WP_003694155.1 | IS110-like element ISNgo3 family transposase | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 10997.86 Da Isoelectric Point: 10.0290
>NTDB_id=1143998 C7S05_RS13890 WP_106278844.1 2168076..2168387(-) (pilE) [Neisseria gonorrhoeae strain WHO F]
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNNGKWPKDNASAGVASPPPTS
KANMLKALRSKTASLPPKWLQPA
MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNNGKWPKDNASAGVASPPPTS
KANMLKALRSKTASLPPKWLQPA
Nucleotide
Download Length: 312 bp
>NTDB_id=1143998 C7S05_RS13890 WP_106278844.1 2168076..2168387(-) (pilE) [Neisseria gonorrhoeae strain WHO F]
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCGGCATACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGAGTATTACCTGAATAACGGCAAATGGCCGAAAGACAACGCTTCTGCCGGCGTGGCATCCCCCCCACCGACATCA
AAGGCAAATATGTTAAAAGCGTTACGGTCGAAAACGGCGTCGTTACCGCCCAAATGGCTTCAACCGGCGTAA
ATGAATACCCTTCAAAAAGGCTTTACCCTTATCGAGCTGATGATTGTGATCGCCATCGTCGGCATTTTGGCGGCAGTCGC
CCTTCCGGCATACCAAGACTACACCGCCCGCGCGCAAGTTTCCGAAGCCATCCTTTTGGCCGAAGGTCAAAAATCAGCCG
TTACCGAGTATTACCTGAATAACGGCAAATGGCCGAAAGACAACGCTTCTGCCGGCGTGGCATCCCCCCCACCGACATCA
AAGGCAAATATGTTAAAAGCGTTACGGTCGAAAACGGCGTCGTTACCGCCCAAATGGCTTCAACCGGCGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
81.72 |
90.291 |
0.738 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
96 |
72.816 |
0.699 |
| pilA/pilA1 | Eikenella corrodens VA1 |
53.571 |
81.553 |
0.437 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
58.667 |
72.816 |
0.427 |
| pilA2 | Legionella pneumophila str. Paris |
58.667 |
72.816 |
0.427 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
66.129 |
60.194 |
0.398 |
| comP | Acinetobacter baylyi ADP1 |
67.241 |
56.311 |
0.379 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
66.667 |
55.34 |
0.369 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
40.86 |
90.291 |
0.369 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
60.317 |
61.165 |
0.369 |