Detailed information NTG1143682

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: BJR96_RS01245
• Genome accession: NZ_LT545678
• Coordinates: 212486..212881 (+)
• Length: 131 a.a.
• NCBI ID: WP_000282449.1
• Uniprot ID: A0A0H1UUC1
• Organism: Streptococcus agalactiae isolate SA111
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 207486..217881

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BJR96_RS01210 (SA111_00226)	proC	207884..208654 (-)	771	WP_001872483.1	pyrroline-5-carboxylate reductase	-
BJR96_RS01215 (SA111_00227)	pepA	208724..209791 (-)	1068	WP_001281321.1	glutamyl aminopeptidase	-
BJR96_RS01220	-	209971..210211 (-)	241	Protein_186	hypothetical protein	-
BJR96_RS01225 (SA111_00228)	-	210372..210656 (+)	285	WP_000791272.1	DUF4651 domain-containing protein	-
BJR96_RS01230 (SA111_00229)	-	210653..210976 (+)	324	WP_000602783.1	thioredoxin family protein	-
BJR96_RS01235 (SA111_00230)	ytpR	211009..211635 (+)	627	WP_000578330.1	YtpR family tRNA-binding protein	-
BJR96_RS01240 (SA111_00231)	-	211689..212405 (-)	717	WP_000186179.1	class I SAM-dependent methyltransferase	-
BJR96_RS01245 (SA111_00232)	ssbA	212486..212881 (+)	396	WP_000282449.1	single-stranded DNA-binding protein	Machinery gene
BJR96_RS01250 (SA111_00233)	-	213005..213649 (+)	645	WP_000416617.1	HAD family hydrolase	-
BJR96_RS01255 (SA111_00234)	-	213676..215421 (+)	1746	WP_000930335.1	LytS/YhcK type 5TM receptor domain-containing protein	-
BJR96_RS01260 (SA111_00235)	-	215402..216142 (+)	741	WP_000697628.1	LytR/AlgR family response regulator transcription factor	-
BJR96_RS01265 (SA111_00236)	-	216312..216767 (+)	456	WP_000683315.1	CidA/LrgA family protein	-
BJR96_RS01270 (SA111_00237)	lrgB	216769..217497 (+)	729	WP_000394889.1	antiholin-like protein LrgB	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14760.77 Da
• Isoelectric Point: 7.0189

>NTDB_id=1143682 BJR96_RS01245 WP_000282449.1 212486..212881(+) (ssbA) [Streptococcus agalactiae isolate SA111]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISVDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1143682 BJR96_RS01245 WP_000282449.1 212486..212881(+) (ssbA) [Streptococcus agalactiae isolate SA111]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAGTAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A0H1UUC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.809
ssbB/cilA	Streptococcus pneumoniae R6	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae Rx1	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae D39	78.626	100	0.786
ssbB/cilA	Streptococcus pneumoniae TIGR4	77.863	100	0.779
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.771
ssbB/cilA	Streptococcus mitis NCTC 12261	77.099	100	0.771
ssbB/cilA	Streptococcus mitis SK321	77.099	100	0.771
ssbB	Lactococcus lactis subsp. cremoris KW2	61.404	87.023	0.534
ssbA	Bacillus subtilis subsp. subtilis str. 168	51.887	80.916	0.42
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405