Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | DQN71_RS00990 | Genome accession | NZ_LS483471 |
| Coordinates | 158552..158947 (+) | Length | 131 a.a. |
| NCBI ID | WP_015604291.1 | Uniprot ID | A0A0F2CUG1 |
| Organism | Streptococcus cristatus strain NCTC13807 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 153552..163947
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN71_RS00950 (NCTC13807_00181) | - | 153559..153762 (+) | 204 | WP_002896748.1 | helix-turn-helix transcriptional regulator | - |
| DQN71_RS00955 (NCTC13807_00182) | - | 153759..153923 (+) | 165 | WP_015604284.1 | hypothetical protein | - |
| DQN71_RS00960 (NCTC13807_00183) | - | 153933..154367 (+) | 435 | WP_015604285.1 | hypothetical protein | - |
| DQN71_RS00965 (NCTC13807_00184) | - | 154421..155905 (-) | 1485 | WP_015604286.1 | DUF1846 domain-containing protein | - |
| DQN71_RS00970 (NCTC13807_00185) | pepA | 156025..157089 (-) | 1065 | WP_015604287.1 | glutamyl aminopeptidase | - |
| DQN71_RS00975 (NCTC13807_00186) | - | 157216..157500 (+) | 285 | WP_015604288.1 | DUF4651 domain-containing protein | - |
| DQN71_RS00980 (NCTC13807_00187) | - | 157500..157814 (+) | 315 | WP_015604289.1 | thioredoxin family protein | - |
| DQN71_RS00985 (NCTC13807_00188) | ytpR | 157845..158471 (+) | 627 | WP_015604290.1 | YtpR family tRNA-binding protein | - |
| DQN71_RS00990 (NCTC13807_00189) | ssbB/cilA | 158552..158947 (+) | 396 | WP_015604291.1 | single-stranded DNA-binding protein | Machinery gene |
| DQN71_RS00995 (NCTC13807_00190) | - | 159208..159504 (+) | 297 | WP_015604292.1 | WXG100 family type VII secretion target | - |
| DQN71_RS01000 (NCTC13807_00191) | - | 159584..160003 (+) | 420 | WP_015604293.1 | DUF5082 domain-containing protein | - |
| DQN71_RS01005 (NCTC13807_00192) | - | 160019..160282 (+) | 264 | WP_015604294.1 | hypothetical protein | - |
| DQN71_RS01010 (NCTC13807_00193) | - | 160306..160965 (+) | 660 | WP_111694478.1 | DUF4176 domain-containing protein | - |
| DQN71_RS01015 (NCTC13807_00194) | - | 160962..162356 (+) | 1395 | WP_111694479.1 | T7SS effector LXG polymorphic toxin | - |
| DQN71_RS01020 (NCTC13807_00195) | - | 162391..163137 (+) | 747 | WP_015604299.1 | hypothetical protein | - |
| DQN71_RS01025 (NCTC13807_00196) | - | 163299..163613 (+) | 315 | WP_015604300.1 | DUF4176 domain-containing protein | - |
| DQN71_RS11800 (NCTC13807_00197) | - | 163732..163944 (+) | 213 | WP_041826761.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14702.56 Da Isoelectric Point: 6.4772
>NTDB_id=1142292 DQN71_RS00990 WP_015604291.1 158552..158947(+) (ssbB/cilA) [Streptococcus cristatus strain NCTC13807]
MYNKVIIIGRLTATPELHKTANDKSVARATVAVNRRYKSQNGEREADFINLVVWGRLAETLASYASKGSLISLDGELRSR
RYEKDGTTHYVTEVLCSGFQLLESRAQRALRENNTGADLADLVLEEEELPF
MYNKVIIIGRLTATPELHKTANDKSVARATVAVNRRYKSQNGEREADFINLVVWGRLAETLASYASKGSLISLDGELRSR
RYEKDGTTHYVTEVLCSGFQLLESRAQRALRENNTGADLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1142292 DQN71_RS00990 WP_015604291.1 158552..158947(+) (ssbB/cilA) [Streptococcus cristatus strain NCTC13807]
ATGTATAATAAAGTTATCATCATTGGCCGGTTGACGGCTACACCAGAGTTACACAAGACAGCAAATGACAAGTCGGTTGC
GCGTGCGACAGTGGCTGTGAATCGCCGCTACAAGAGTCAAAATGGAGAGCGTGAAGCGGATTTTATCAACCTTGTCGTTT
GGGGACGCTTGGCTGAAACCTTGGCAAGTTACGCTAGTAAGGGGAGTCTGATTTCTCTGGATGGAGAATTGCGGAGCCGT
CGCTATGAAAAGGATGGAACCACTCATTATGTGACAGAAGTTCTTTGCAGTGGTTTTCAGCTTTTAGAAAGCCGAGCCCA
GAGAGCACTCCGTGAGAATAATACTGGAGCAGACCTAGCAGATTTGGTACTGGAAGAAGAGGAACTTCCTTTTTAA
ATGTATAATAAAGTTATCATCATTGGCCGGTTGACGGCTACACCAGAGTTACACAAGACAGCAAATGACAAGTCGGTTGC
GCGTGCGACAGTGGCTGTGAATCGCCGCTACAAGAGTCAAAATGGAGAGCGTGAAGCGGATTTTATCAACCTTGTCGTTT
GGGGACGCTTGGCTGAAACCTTGGCAAGTTACGCTAGTAAGGGGAGTCTGATTTCTCTGGATGGAGAATTGCGGAGCCGT
CGCTATGAAAAGGATGGAACCACTCATTATGTGACAGAAGTTCTTTGCAGTGGTTTTCAGCTTTTAGAAAGCCGAGCCCA
GAGAGCACTCCGTGAGAATAATACTGGAGCAGACCTAGCAGATTTGGTACTGGAAGAAGAGGAACTTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
83.969 |
100 |
0.84 |
| ssbB/cilA | Streptococcus mitis SK321 |
83.206 |
100 |
0.832 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
82.443 |
100 |
0.824 |
| ssbA | Streptococcus mutans UA159 |
77.863 |
100 |
0.779 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
73.282 |
100 |
0.733 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
58.929 |
85.496 |
0.504 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50 |
80.916 |
0.405 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
45.133 |
86.26 |
0.389 |