Detailed information NTG1142012

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: DQL12_RS10580
• Genome accession: NZ_LS483450
• Coordinates: 1942198..1942632 (-)
• Length: 144 a.a.
• NCBI ID: WP_033606693.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 4041STDY6583227
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1937198..1947632

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQL12_RS10545	rnpA	1937612..1937983 (-)	372	WP_044793385.1	ribonuclease P protein component	-
DQL12_RS12510	-	1938000..1938131 (-)	132	WP_000768904.1	hypothetical protein	-
DQL12_RS10550	-	1938132..1939322 (-)	1191	WP_000167765.1	acetate kinase	-
DQL12_RS10555	comYH	1939373..1940326 (-)	954	WP_050255606.1	class I SAM-dependent methyltransferase	Machinery gene
DQL12_RS10560	-	1940387..1940981 (-)	595	Protein_1953	class I SAM-dependent methyltransferase	-
DQL12_RS10565	comGG/cglG	1941118..1941531 (-)	414	WP_050255604.1	competence type IV pilus minor pilin ComGG	Machinery gene
DQL12_RS10570	comGF/cglF	1941509..1941970 (-)	462	WP_000250520.1	competence type IV pilus minor pilin ComGF	Machinery gene
DQL12_RS10575	comGE/cglE	1941933..1942235 (-)	303	WP_000413382.1	competence type IV pilus minor pilin ComGE	Machinery gene
DQL12_RS10580	comGD/cglD	1942198..1942632 (-)	435	WP_033606693.1	competence type IV pilus minor pilin ComGD	Machinery gene
DQL12_RS10585	comGC/cglC	1942595..1942918 (-)	324	WP_000738628.1	comG operon protein ComGC	Machinery gene
DQL12_RS10590	comGB/cglB	1942920..1943936 (-)	1017	WP_077141332.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQL12_RS10595	comGA/cglA/cilD	1943884..1944825 (-)	942	WP_000249550.1	competence type IV pilus ATPase ComGA	Machinery gene
DQL12_RS10600	-	1944901..1945266 (-)	366	WP_000286415.1	DUF1033 family protein	-
DQL12_RS10605	-	1945417..1946475 (-)	1059	WP_001861944.1	zinc-dependent alcohol dehydrogenase family protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15802.39 Da
• Isoelectric Point: 10.5150

>NTDB_id=1142012 DQL12_RS10580 WP_033606693.1 1942198..1942632(-) (comGD/cglD) [Streptococcus pneumoniae strain 4041STDY6583227]
MINKILVKSLKIKAFTMLESLLVLGLVSILALGLSGSVQSTFAAVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQM
ISNGSQKLPVPKGIQAPSGQSITFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1142012 DQL12_RS10580 WP_033606693.1 1942198..1942632(-) (comGD/cglD) [Streptococcus pneumoniae strain 4041STDY6583227]
ATGATAAACAAAATACTAGTCAAATCGTTAAAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGCTCTGTCCAGTCCACTTTTGCAGCGGTAGAGGAACAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACCCAAAAACGCAGTGTAGCTAGTCAACAAAAGACTAGTCTGAACTTGGATGGGCAGATG
ATTAGCAATGGCAGTCAAAAGTTGCCAGTCCCTAAAGGAATTCAGGCCCCATCAGGCCAAAGTATTACATTTGACCGTGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACCAGTAAAGGAGCGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	94.444	100	0.944
comGD/cglD	Streptococcus pneumoniae Rx1	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae D39	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae R6	98.496	92.361	0.91
comGD/cglD	Streptococcus pneumoniae TIGR4	97.744	92.361	0.903
comGD/cglD	Streptococcus mitis SK321	96.241	92.361	0.889
comYD	Streptococcus gordonii str. Challis substr. CH1	56.835	96.528	0.549
comYD	Streptococcus mutans UA140	49.612	89.583	0.444
comYD	Streptococcus mutans UA159	49.612	89.583	0.444