Detailed information NTG1140679

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DQN40_RS00785
• Genome accession: NZ_LS483413
• Coordinates: 128789..129115 (+)
• Length: 108 a.a.
• NCBI ID: WP_084916953.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123789..134115

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQN40_RS00770 (NCTC7136_00160)	-	126433..126798 (+)	366	WP_003055257.1	DUF1033 family protein	-
DQN40_RS00775 (NCTC7136_00161)	comGA/cglA	126879..127820 (+)	942	WP_014611930.1	competence type IV pilus ATPase ComGA	Machinery gene
DQN40_RS00780 (NCTC7136_00162)	comYB	127756..128787 (+)	1032	WP_084916952.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQN40_RS00785 (NCTC7136_00163)	comYC	128789..129115 (+)	327	WP_084916953.1	competence type IV pilus major pilin ComGC	Machinery gene
DQN40_RS00790 (NCTC7136_00164)	comGD	129090..129518 (+)	429	WP_257638821.1	competence type IV pilus minor pilin ComGD	-
DQN40_RS00795 (NCTC7136_00165)	comGE	129526..129771 (+)	246	WP_049519695.1	competence type IV pilus minor pilin ComGE	-
DQN40_RS00800 (NCTC7136_00166)	comGF	129752..130192 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	-
DQN40_RS00805 (NCTC7136_00167)	comGG	130215..130544 (+)	330	WP_003058539.1	competence type IV pilus minor pilin ComGG	-
DQN40_RS00810 (NCTC7136_00168)	comYH	130607..131560 (+)	954	WP_003060701.1	class I SAM-dependent methyltransferase	Machinery gene
DQN40_RS00815 (NCTC7136_00169)	-	131619..132815 (+)	1197	WP_084916957.1	acetate kinase	-
DQN40_RS00820 (NCTC7136_00170)	-	133123..133329 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
DQN40_RS00825 (NCTC7136_00171)	-	133432..134112 (+)	681	WP_003060329.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12439.42 Da
• Isoelectric Point: 9.2972

>NTDB_id=1140679 DQN40_RS00785 WP_084916953.1 128789..129115(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLQQLKD
DGSITDKQVKAYTDYYGKHRDETQKLQP

Nucleotide

• Length: 327 bp

>NTDB_id=1140679 DQN40_RS00785 WP_084916953.1 128789..129115(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC7136]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTACAACAGTTGAAAGAC
GATGGCAGTATTACAGATAAACAGGTAAAAGCTTACACAGACTATTATGGAAAACACAGAGATGAAACTCAAAAACTACA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	58.095	97.222	0.565
comGC/cglC	Streptococcus mitis SK321	52.83	98.148	0.519
comGC/cglC	Streptococcus pneumoniae D39	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae R6	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	51.402	99.074	0.509
comGC	Lactococcus lactis subsp. cremoris KW2	53.398	95.37	0.509
comGC/cglC	Streptococcus mitis NCTC 12261	55.102	90.741	0.5
comYC	Streptococcus mutans UA140	52.475	93.519	0.491
comYC	Streptococcus mutans UA159	52.475	93.519	0.491
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417