Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | DQM66_RS09105 | Genome accession | NZ_LS483374 |
| Coordinates | 1712470..1712865 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain NCTC7466 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1707470..1717865
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM66_RS09080 (NCTC7466_01744) | - | 1707811..1708344 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| DQM66_RS09085 (NCTC7466_01745) | - | 1708698..1708904 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| DQM66_RS09090 (NCTC7466_01746) | - | 1709064..1710293 (+) | 1230 | WP_000436473.1 | ISL3 family transposase | - |
| DQM66_RS09095 (NCTC7466_01747) | groL | 1710392..1712014 (-) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| DQM66_RS09100 (NCTC7466_01748) | groES | 1712030..1712314 (-) | 285 | WP_000917304.1 | co-chaperone GroES | - |
| DQM66_RS09105 (NCTC7466_01749) | ssbB/cilA | 1712470..1712865 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| DQM66_RS09110 (NCTC7466_01750) | - | 1712943..1713704 (-) | 762 | WP_001107755.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| DQM66_RS09115 (NCTC7466_01751) | ytpR | 1713737..1714363 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| DQM66_RS09120 (NCTC7466_01752) | - | 1714379..1714696 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| DQM66_RS09125 (NCTC7466_01753) | - | 1714693..1714992 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| DQM66_RS11735 | - | 1715086..1715217 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| DQM66_RS11555 | - | 1715242..1715304 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| DQM66_RS09130 | - | 1715329..1715520 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| DQM66_RS09135 (NCTC7466_01754) | - | 1715681..1716355 (-) | 675 | WP_000725742.1 | LiaF transmembrane domain-containing protein | - |
| DQM66_RS09140 (NCTC7466_01755) | - | 1716361..1716807 (-) | 447 | WP_000776587.1 | LytTR family DNA-binding domain-containing protein | - |
| DQM66_RS09145 (NCTC7466_01756) | - | 1716921..1717424 (-) | 504 | WP_000800927.1 | phosphatase PAP2 family protein | - |
| DQM66_RS09150 (NCTC7466_01757) | - | 1717421..1717783 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=1139065 DQM66_RS09105 WP_000282467.1 1712470..1712865(-) (ssbB/cilA) [Streptococcus pneumoniae strain NCTC7466]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1139065 DQM66_RS09105 WP_000282467.1 1712470..1712865(-) (ssbB/cilA) [Streptococcus pneumoniae strain NCTC7466]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTTAATATGGTTCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |