Detailed information NTG1138800

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: DQM60_RS09490
• Genome accession: NZ_LS483366
• Coordinates: 2025774..2026166 (-)
• Length: 130 a.a.
• NCBI ID: WP_014632554.1
• Uniprot ID: A0AB37DE84
• Organism: Streptococcus salivarius strain NCTC7366
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2020774..2031166

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM60_RS09450 (NCTC7366_01914)	dapD	2020843..2021541 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
DQM60_RS09455 (NCTC7366_01915)	-	2021627..2022379 (-)	753	WP_002887000.1	HAD family hydrolase	-
DQM60_RS09460 (NCTC7366_01916)	-	2022493..2023332 (-)	840	WP_002887001.1	methyltransferase domain-containing protein	-
DQM60_RS09470 (NCTC7366_01918)	-	2023753..2023911 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
DQM60_RS09475 (NCTC7366_01919)	-	2023931..2024098 (+)	168	WP_002887002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
DQM60_RS09480 (NCTC7366_01920)	-	2024146..2024400 (+)	255	WP_045001373.1	hypothetical protein	-
DQM60_RS09485 (NCTC7366_01921)	tadA	2024486..2025004 (-)	519	WP_014632555.1	tRNA adenosine(34) deaminase TadA	-
DQM60_RS09490 (NCTC7366_01922)	ssbA	2025774..2026166 (-)	393	WP_014632554.1	single-stranded DNA-binding protein	Machinery gene
DQM60_RS09495 (NCTC7366_01923)	-	2026594..2027271 (-)	678	WP_045001371.1	CPBP family intramembrane glutamic endopeptidase	-
DQM60_RS09500 (NCTC7366_01924)	ytpR	2027537..2028160 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
DQM60_RS09505 (NCTC7366_01925)	-	2028192..2028716 (-)	525	WP_014632552.1	hypothetical protein	-
DQM60_RS09510 (NCTC7366_01926)	-	2028720..2029034 (-)	315	WP_002885723.1	thioredoxin family protein	-
DQM60_RS09515 (NCTC7366_01927)	-	2029031..2029315 (-)	285	WP_002885838.1	DUF4651 domain-containing protein	-
DQM60_RS09520 (NCTC7366_01928)	pepA	2029415..2030482 (+)	1068	WP_014632550.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.71 Da
• Isoelectric Point: 6.9843

>NTDB_id=1138800 DQM60_RS09490 WP_014632554.1 2025774..2026166(-) (ssbA) [Streptococcus salivarius strain NCTC7366]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGKTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=1138800 DQM60_RS09490 WP_014632554.1 2025774..2026166(-) (ssbA) [Streptococcus salivarius strain NCTC7366]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGATTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTAAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAGCTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB	Streptococcus sobrinus strain NIDR 6715-7	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	60.714	86.154	0.523
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377