Detailed information NTG1138500

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: DQM53_RS00755
• Genome accession: NZ_LS483361
• Coordinates: 126899..127225 (+)
• Length: 108 a.a.
• NCBI ID: WP_111714771.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 121899..132225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM53_RS00740 (NCTC6179_00151)	-	124543..124908 (+)	366	WP_003055257.1	DUF1033 family protein	-
DQM53_RS00745 (NCTC6179_00152)	comGA/cglA	124989..125930 (+)	942	WP_111714768.1	competence type IV pilus ATPase ComGA	Machinery gene
DQM53_RS00750 (NCTC6179_00153)	comYB	125866..126897 (+)	1032	WP_111717873.1	competence type IV pilus assembly protein ComGB	Machinery gene
DQM53_RS00755 (NCTC6179_00154)	comYC	126899..127225 (+)	327	WP_111714771.1	competence type IV pilus major pilin ComGC	Machinery gene
DQM53_RS00760 (NCTC6179_00155)	comGD	127200..127628 (+)	429	WP_111714773.1	competence type IV pilus minor pilin ComGD	-
DQM53_RS00765 (NCTC6179_00156)	comGE	127636..127881 (+)	246	WP_231871990.1	competence type IV pilus minor pilin ComGE	-
DQM53_RS00770 (NCTC6179_00157)	comGF	127862..128302 (+)	441	WP_111714778.1	competence type IV pilus minor pilin ComGF	-
DQM53_RS00775 (NCTC6179_00158)	comGG	128325..128654 (+)	330	WP_231872024.1	competence type IV pilus minor pilin ComGG	-
DQM53_RS00780 (NCTC6179_00159)	comYH	128717..129670 (+)	954	WP_111714783.1	class I SAM-dependent methyltransferase	Machinery gene
DQM53_RS00785 (NCTC6179_00160)	-	129729..130925 (+)	1197	WP_111714785.1	acetate kinase	-
DQM53_RS00790 (NCTC6179_00161)	-	131231..131437 (+)	207	WP_111714788.1	helix-turn-helix transcriptional regulator	-
DQM53_RS00795 (NCTC6179_00162)	-	131540..132220 (+)	681	WP_111714790.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12345.34 Da
• Isoelectric Point: 9.6248

>NTDB_id=1138500 DQM53_RS00755 WP_111714771.1 126899..127225(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSQLKT
DGSITDKQVKAYTDYYEKHTNEKSSLKP

Nucleotide

• Length: 327 bp

>NTDB_id=1138500 DQM53_RS00755 WP_111714771.1 126899..127225(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTAAGTCAATTAAAGACA
GATGGCAGTATTACAGATAAACAGGTAAAAGCTTACACAGACTATTACGAAAAACATACCAATGAAAAGTCCAGTCTTAA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	58.416	93.519	0.546
comGC	Lactococcus lactis subsp. cremoris KW2	53.271	99.074	0.528
comGC/cglC	Streptococcus mitis SK321	56.566	91.667	0.519
comGC/cglC	Streptococcus mitis NCTC 12261	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae D39	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae Rx1	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae R6	54.545	91.667	0.5
comYC	Streptococcus mutans UA140	56.383	87.037	0.491
comYC	Streptococcus mutans UA159	56.383	87.037	0.491
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417