Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM53_RS00780 | Genome accession | NZ_LS483361 |
| Coordinates | 128717..129670 (+) | Length | 317 a.a. |
| NCBI ID | WP_111714783.1 | Uniprot ID | A0A9X8SWY6 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 123717..134670
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM53_RS00740 (NCTC6179_00151) | - | 124543..124908 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| DQM53_RS00745 (NCTC6179_00152) | comGA/cglA | 124989..125930 (+) | 942 | WP_111714768.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM53_RS00750 (NCTC6179_00153) | comYB | 125866..126897 (+) | 1032 | WP_111717873.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM53_RS00755 (NCTC6179_00154) | comYC | 126899..127225 (+) | 327 | WP_111714771.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM53_RS00760 (NCTC6179_00155) | comGD | 127200..127628 (+) | 429 | WP_111714773.1 | competence type IV pilus minor pilin ComGD | - |
| DQM53_RS00765 (NCTC6179_00156) | comGE | 127636..127881 (+) | 246 | WP_231871990.1 | competence type IV pilus minor pilin ComGE | - |
| DQM53_RS00770 (NCTC6179_00157) | comGF | 127862..128302 (+) | 441 | WP_111714778.1 | competence type IV pilus minor pilin ComGF | - |
| DQM53_RS00775 (NCTC6179_00158) | comGG | 128325..128654 (+) | 330 | WP_231872024.1 | competence type IV pilus minor pilin ComGG | - |
| DQM53_RS00780 (NCTC6179_00159) | comYH | 128717..129670 (+) | 954 | WP_111714783.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM53_RS00785 (NCTC6179_00160) | - | 129729..130925 (+) | 1197 | WP_111714785.1 | acetate kinase | - |
| DQM53_RS00790 (NCTC6179_00161) | - | 131231..131437 (+) | 207 | WP_111714788.1 | helix-turn-helix transcriptional regulator | - |
| DQM53_RS00795 (NCTC6179_00162) | - | 131540..132220 (+) | 681 | WP_111714790.1 | type II CAAX endopeptidase family protein | - |
| DQM53_RS00800 (NCTC6179_00163) | - | 132238..132675 (+) | 438 | WP_111714792.1 | hypothetical protein | - |
| DQM53_RS00805 (NCTC6179_00164) | proC | 132814..133590 (-) | 777 | WP_111714795.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36034.92 Da Isoelectric Point: 4.7910
>NTDB_id=1138501 DQM53_RS00780 WP_111714783.1 128717..129670(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDISKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDISKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVALITLPDSIFGHPSNAKSIIVLQKQTDHPTETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1138501 DQM53_RS00780 WP_111714783.1 128717..129670(+) (comYH) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC6179]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCCAGTCCTCAAGTTGCCCAGAACATTA
ACAAATTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTTCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTGCTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACAGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCCAGTCCTCAAGTTGCCCAGAACATTA
ACAAATTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTTCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTGCTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCTTGATTACTCTACCAGATTCTATATTTGGTCA
TCCTTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGACAGAAACCTTTGTTTATCCTATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |