Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | DQL56_RS09735 | Genome accession | NZ_LS483342 |
| Coordinates | 1846077..1846472 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282447.1 | Uniprot ID | A0AAV3JLT6 |
| Organism | Streptococcus agalactiae strain NCTC11930 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1841077..1851472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL56_RS09710 (NCTC11930_01913) | lrgB | 1841461..1842189 (-) | 729 | Protein_1784 | antiholin-like protein LrgB | - |
| DQL56_RS09715 (NCTC11930_01914) | - | 1842191..1842646 (-) | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| DQL56_RS09720 (NCTC11930_01915) | - | 1842816..1843556 (-) | 741 | WP_000697630.1 | LytR/AlgR family response regulator transcription factor | - |
| DQL56_RS09725 (NCTC11930_01916) | - | 1843537..1845282 (-) | 1746 | WP_000930334.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| DQL56_RS09730 (NCTC11930_01917) | - | 1845309..1845953 (-) | 645 | WP_000416612.1 | HAD family hydrolase | - |
| DQL56_RS09735 (NCTC11930_01918) | ssbA | 1846077..1846472 (-) | 396 | WP_000282447.1 | single-stranded DNA-binding protein | Machinery gene |
| DQL56_RS09740 (NCTC11930_01919) | - | 1846553..1847269 (+) | 717 | WP_000186185.1 | class I SAM-dependent methyltransferase | - |
| DQL56_RS09745 (NCTC11930_01920) | ytpR | 1847323..1847949 (-) | 627 | WP_000578328.1 | YtpR family tRNA-binding protein | - |
| DQL56_RS09750 (NCTC11930_01921) | - | 1847982..1848305 (-) | 324 | WP_000602781.1 | thioredoxin family protein | - |
| DQL56_RS09755 (NCTC11930_01922) | - | 1848302..1848586 (-) | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| DQL56_RS09760 (NCTC11930_01923) | - | 1848747..1848986 (+) | 240 | WP_000660180.1 | hypothetical protein | - |
| DQL56_RS09765 (NCTC11930_01924) | pepA | 1849171..1850238 (+) | 1068 | WP_001281323.1 | glutamyl aminopeptidase | - |
| DQL56_RS09770 (NCTC11930_01925) | proC | 1850308..1851078 (+) | 771 | WP_001865901.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14774.80 Da Isoelectric Point: 7.0189
>NTDB_id=1137549 DQL56_RS09735 WP_000282447.1 1846077..1846472(-) (ssbA) [Streptococcus agalactiae strain NCTC11930]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1137549 DQL56_RS09735 WP_000282447.1 1846077..1846472(-) (ssbA) [Streptococcus agalactiae strain NCTC11930]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTGAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGCTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAACGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.809 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.526 |
87.023 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |