Detailed information NTG1136184

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: DQM44_RS00810
• Genome accession: NZ_LS483318
• Coordinates: 130193..130588 (+)
• Length: 131 a.a.
• NCBI ID: WP_003053955.1
• Uniprot ID: A0AAE9R0G1
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370
• Function: ssDNA binding (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	128697..130045	130193..130588	flank	148

Gene organization within MGE regions

Location: 128697..130588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DQM44_RS00810 (NCTC5370_00167)	ssbA	130193..130588 (+)	396	WP_003053955.1	single-stranded DNA-binding protein	Machinery gene

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14787.96 Da
• Isoelectric Point: 8.0157

>NTDB_id=1136184 DQM44_RS00810 WP_003053955.1 130193..130588(+) (ssbA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVTNDLVDLVLEEDTLPF

Nucleotide

• Length: 396 bp

>NTDB_id=1136184 DQM44_RS00810 WP_003053955.1 130193..130588(+) (ssbA) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC5370]
ATGTATAATAAAGTGATAGCAATCGGTCGTTTGGTGGCTAAACCAGAATTGGTAAAAACCGCTACGGATAAGCATGTAGC
ACGTCTCTCTTTAGCTGTTAATCGAAGATTTAAAAATGCTTCTGGAGAGCGAGAAGCTGATTTTATTTCAGTTGTTGTTT
GGGGAAAATTAGCAGAAACTCTGGTTTCTTATGCTAGCAAAGGTAGTTTGATGTCTATTGATGGCGAACTTAGGACCCGC
AAGTATGATAAAGATGGGCAAGTGCATTATGTGACAGAAGTTCTCTGCCAATCATTTCAACTGCTTGAAAGTCGTGCTCA
GCGCGCTATGAGAGAAAATAATGTTACTAATGATCTAGTTGATTTAGTCTTAGAAGAAGATACTCTTCCCTTTTGA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB	Streptococcus sobrinus strain NIDR 6715-7	72.519	100	0.725
ssbB/cilA	Streptococcus pneumoniae Rx1	70.229	100	0.702
ssbB/cilA	Streptococcus pneumoniae D39	70.229	100	0.702
ssbB/cilA	Streptococcus pneumoniae R6	70.229	100	0.702
ssbB/cilA	Streptococcus mitis NCTC 12261	70.229	100	0.702
ssbB/cilA	Streptococcus pneumoniae TIGR4	70.229	100	0.702
ssbB/cilA	Streptococcus mitis SK321	69.466	100	0.695
ssbB	Lactococcus lactis subsp. cremoris KW2	62.281	87.023	0.542
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405
ssbA	Bacillus subtilis subsp. subtilis str. 168	49.057	80.916	0.397