Detailed information NTG1128345

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: FJH52_RS09115
• Genome accession: NZ_LR595848
• Coordinates: 1817974..1818369 (-)
• Length: 131 a.a.
• NCBI ID: WP_000282467.1
• Uniprot ID: A0A098Z0L0
• Organism: Streptococcus pneumoniae strain 4559 isolate 4559
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1812974..1823369

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FJH52_RS09090	-	1813197..1813730 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
FJH52_RS09095	-	1814087..1814293 (-)	207	WP_000775827.1	transcriptional regulator	-
FJH52_RS09100	-	1814453..1815682 (+)	1230	WP_000436406.1	ISL3 family transposase	-
FJH52_RS09105	groL	1815782..1817404 (-)	1623	WP_000031585.1	chaperonin GroEL	-
FJH52_RS09110	groES	1817420..1817704 (-)	285	WP_000917330.1	co-chaperone GroES	-
FJH52_RS09115	ssbB/cilA	1817974..1818369 (-)	396	WP_000282467.1	single-stranded DNA-binding protein	Machinery gene
FJH52_RS09120	-	1818447..1819208 (-)	762	WP_001107758.1	SDR family NAD(P)-dependent oxidoreductase	-
FJH52_RS09125	ytpR	1819241..1819867 (-)	627	WP_000578309.1	YtpR family tRNA-binding protein	-
FJH52_RS09130	-	1819883..1820200 (-)	318	WP_000615767.1	thioredoxin family protein	-
FJH52_RS09135	-	1820197..1820496 (-)	300	WP_001013974.1	DUF4651 domain-containing protein	-
FJH52_RS11330	-	1820590..1820721 (+)	132	WP_001811306.1	hypothetical protein	-
FJH52_RS11220	-	1820746..1820826 (-)	81	WP_223200442.1	hypothetical protein	-
FJH52_RS09140	-	1820833..1821024 (-)	192	WP_000291826.1	cell wall-binding protein	-
FJH52_RS09145	-	1821185..1821859 (-)	675	WP_000725742.1	LiaF transmembrane domain-containing protein	-
FJH52_RS09150	-	1821865..1822311 (-)	447	WP_000776587.1	LytTR family DNA-binding domain-containing protein	-
FJH52_RS09155	-	1822425..1822928 (-)	504	WP_000800947.1	phosphatase PAP2 family protein	-
FJH52_RS09160	-	1822925..1823287 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14925.89 Da
• Isoelectric Point: 5.9409

>NTDB_id=1128345 FJH52_RS09115 WP_000282467.1 1817974..1818369(-) (ssbB/cilA) [Streptococcus pneumoniae strain 4559 isolate 4559]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1128345 FJH52_RS09115 WP_000282467.1 1817974..1818369(-) (ssbB/cilA) [Streptococcus pneumoniae strain 4559 isolate 4559]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A098Z0L0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae D39	100	100	1
ssbB/cilA	Streptococcus pneumoniae Rx1	100	100	1
ssbB/cilA	Streptococcus pneumoniae R6	100	100	1
ssbB/cilA	Streptococcus pneumoniae TIGR4	99.237	100	0.992
ssbB/cilA	Streptococcus mitis SK321	98.473	100	0.985
ssbB/cilA	Streptococcus mitis NCTC 12261	98.473	100	0.985
ssbA	Streptococcus mutans UA159	74.809	100	0.748
ssbB	Streptococcus sobrinus strain NIDR 6715-7	70.229	100	0.702
ssbB	Lactococcus lactis subsp. cremoris KW2	59.821	85.496	0.511
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	46.903	86.26	0.405