Detailed information NTG1127834

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: FGL21_RS00860
• Genome accession: NZ_LR594047
• Coordinates: 138265..138591 (+)
• Length: 108 a.a.
• NCBI ID: WP_003055259.1
• Uniprot ID: A0A9X8T184
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 133265..143591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL21_RS00845 (NCTC11554_00173)	-	135909..136274 (+)	366	WP_003055257.1	DUF1033 family protein	-
FGL21_RS00850 (NCTC11554_00174)	comGA/cglA	136355..137296 (+)	942	WP_138127937.1	competence type IV pilus ATPase ComGA	Machinery gene
FGL21_RS00855 (NCTC11554_00175)	comYB	137232..138263 (+)	1032	WP_138128262.1	competence type IV pilus assembly protein ComGB	Machinery gene
FGL21_RS00860 (NCTC11554_00176)	comYC	138265..138591 (+)	327	WP_003055259.1	competence type IV pilus major pilin ComGC	Machinery gene
FGL21_RS00865 (NCTC11554_00177)	comGD	138566..138994 (+)	429	WP_014611932.1	competence type IV pilus minor pilin ComGD	-
FGL21_RS00870 (NCTC11554_00178)	comGE	139002..139247 (+)	246	WP_003058569.1	competence type IV pilus minor pilin ComGE	-
FGL21_RS00875 (NCTC11554_00179)	comGF	139228..139668 (+)	441	WP_003061780.1	competence type IV pilus minor pilin ComGF	-
FGL21_RS00880 (NCTC11554_00180)	comGG	139691..140020 (+)	330	WP_231117501.1	competence type IV pilus minor pilin ComGG	-
FGL21_RS00885 (NCTC11554_00181)	comYH	140083..141036 (+)	954	WP_003060701.1	class I SAM-dependent methyltransferase	Machinery gene
FGL21_RS00890 (NCTC11554_00182)	-	141095..142291 (+)	1197	WP_003058485.1	acetate kinase	-
FGL21_RS00895 (NCTC11554_00183)	-	142597..142803 (+)	207	WP_003058508.1	helix-turn-helix transcriptional regulator	-
FGL21_RS00900 (NCTC11554_00184)	-	142906..143586 (+)	681	WP_012766451.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12384.38 Da
• Isoelectric Point: 9.6412

>NTDB_id=1127834 FGL21_RS00860 WP_003055259.1 138265..138591(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLSQLKT
DGSITDKQVKAYTDYYGKHRDETQKLQP

Nucleotide

• Length: 327 bp

>NTDB_id=1127834 FGL21_RS00860 WP_003055259.1 138265..138591(+) (comYC) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC11554]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTACTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTAAGTCAATTAAAGACT
GATGGCAGTATTACAGATAAGCAGGTAAAAGCTTACACAGACTATTATGGAAAACACAGAGATGAGACTCAAAAACTGCA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	60.194	95.37	0.574
comGC/cglC	Streptococcus mitis SK321	53.774	98.148	0.528
comGC	Lactococcus lactis subsp. cremoris KW2	54.369	95.37	0.519
comGC/cglC	Streptococcus mitis NCTC 12261	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae Rx1	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae D39	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae R6	51.887	98.148	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	51.402	99.074	0.509
comYC	Streptococcus mutans UA140	53.465	93.519	0.5
comYC	Streptococcus mutans UA159	53.465	93.519	0.5
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417