Detailed information NTG1127088

Bioinformatically predicted

Overview

• Name: ssbB
• Type: Machinery gene
• Locus tag: FGK95_RS00925
• Genome accession: NZ_LR590625
• Coordinates: 150113..150508 (+)
• Length: 131 a.a.
• NCBI ID: WP_003046216.1
• Uniprot ID: A0A2D4DQK2
• Organism: Streptococcus canis strain B700072
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 145113..155508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS00880 (SAMEA5186854_00179)	-	145322..145528 (+)	207	WP_003046200.1	helix-turn-helix transcriptional regulator	-
FGK95_RS10705 (SAMEA5186854_00180)	-	145686..146123 (+)	438	WP_138114014.1	hypothetical protein	-
FGK95_RS00895 (SAMEA5186854_00181)	proC	146263..147039 (-)	777	WP_093998733.1	pyrroline-5-carboxylate reductase	-
FGK95_RS00900 (SAMEA5186854_00182)	pepA	147087..148154 (-)	1068	WP_093998732.1	glutamyl aminopeptidase	-
FGK95_RS00910 (SAMEA5186854_00184)	-	148719..148997 (+)	279	WP_003046210.1	DUF4651 domain-containing protein	-
FGK95_RS00915 (SAMEA5186854_00185)	-	149000..149317 (+)	318	WP_003046212.1	thioredoxin family protein	-
FGK95_RS00920 (SAMEA5186854_00186)	ytpR	149336..149962 (+)	627	WP_093998731.1	YtpR family tRNA-binding protein	-
FGK95_RS00925 (SAMEA5186854_00187)	ssbB	150113..150508 (+)	396	WP_003046216.1	single-stranded DNA-binding protein	Machinery gene
FGK95_RS00930 (SAMEA5186854_00188)	-	151068..151709 (-)	642	WP_003046220.1	deoxynucleoside kinase	-
FGK95_RS00935 (SAMEA5186854_00189)	dusB	151729..152706 (-)	978	WP_003046221.1	tRNA dihydrouridine synthase DusB	-
FGK95_RS00940 (SAMEA5186854_00190)	hslO	152693..153565 (-)	873	WP_093998730.1	Hsp33 family molecular chaperone HslO	-
FGK95_RS00945 (SAMEA5186854_00191)	-	153760..154971 (-)	1212	WP_003046224.1	YSIRK-targeted surface antigen transcriptional regulator	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14819.03 Da
• Isoelectric Point: 7.1668

>NTDB_id=1127088 FGK95_RS00925 WP_003046216.1 150113..150508(+) (ssbB) [Streptococcus canis strain B700072]
MYNKVIMIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFISVVVWGKLAETLVSYASKGSLMSIDGELRTR
KYDKDGQVHYVTEVLCQSFQLLESRAQRAMRENNVASDLVDLVLEEEDLPF

Nucleotide

• Length: 396 bp

>NTDB_id=1127088 FGK95_RS00925 WP_003046216.1 150113..150508(+) (ssbB) [Streptococcus canis strain B700072]
ATGTATAATAAAGTAATCATGATTGGTCGTTTGGTGGCTAAACCTGAATTGGTAAAAACAGCTACGGATAAGCATGTGGC
GCGTCTATCTTTGGCTGTTAATCGGAGGTTCAAGAATGCTTCAGGAGAGCGAGAAGCTGATTTTATTTCTGTTGTTGTCT
GGGGAAAGTTAGCAGAAACTCTGGTTTCTTATGCCAGTAAAGGTAGTTTGATGTCTATTGATGGCGAGCTTAGAACCCGC
AAATATGATAAAGATGGGCAAGTGCATTATGTGACGGAAGTGCTATGTCAGTCCTTTCAGTTATTAGAAAGTCGTGCTCA
GCGTGCAATGCGAGAAAATAATGTGGCCAGTGACTTGGTGGATTTGGTCTTGGAAGAGGAGGACTTGCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A2D4DQK2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB	Streptococcus sobrinus strain NIDR 6715-7	74.809	100	0.748
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae Rx1	71.756	100	0.718
ssbB/cilA	Streptococcus pneumoniae D39	71.756	100	0.718
ssbB/cilA	Streptococcus pneumoniae R6	71.756	100	0.718
ssbB/cilA	Streptococcus mitis NCTC 12261	71.756	100	0.718
ssbB/cilA	Streptococcus pneumoniae TIGR4	70.992	100	0.71
ssbB/cilA	Streptococcus mitis SK321	70.229	100	0.702
ssbB	Lactococcus lactis subsp. cremoris KW2	61.207	88.55	0.542
ssb	Latilactobacillus sakei subsp. sakei 23K	46.61	90.076	0.42
ssbA	Bacillus subtilis subsp. subtilis str. 168	49.057	80.916	0.397