Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EL305_RS10215 | Genome accession | NZ_LR134528 |
| Coordinates | 1712642..1713085 (-) | Length | 147 a.a. |
| NCBI ID | WP_002226857.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NCTC12163 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1707642..1718085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL305_RS10200 (NCTC12163_01715) | - | 1708526..1710562 (+) | 2037 | WP_002236625.1 | M3 family metallopeptidase | - |
| EL305_RS10205 (NCTC12163_01716) | - | 1710838..1711404 (-) | 567 | WP_002236626.1 | manganese efflux pump MntP family protein | - |
| EL305_RS10210 (NCTC12163_01718) | - | 1711880..1712380 (-) | 501 | WP_002220237.1 | REP-associated tyrosine transposase | - |
| EL305_RS10215 (NCTC12163_01719) | pilE | 1712642..1713085 (-) | 444 | WP_002226857.1 | pilin | Machinery gene |
| EL305_RS10230 (NCTC12163_01720) | katA | 1714197..1715711 (-) | 1515 | WP_002216305.1 | catalase KatA | - |
| EL305_RS10235 (NCTC12163_01721) | - | 1716060..1716911 (+) | 852 | WP_002236629.1 | RNA polymerase sigma-54 factor | - |
| EL305_RS14130 (NCTC12163_01722) | - | 1717154..1717534 (-) | 381 | WP_002236307.1 | glycosyltransferase | - |
Sequence
Protein
Download Length: 147 a.a. Molecular weight: 15291.57 Da Isoelectric Point: 9.3696
>NTDB_id=1124040 EL305_RS10215 WP_002226857.1 1712642..1713085(-) (pilE) [Neisseria meningitidis strain NCTC12163]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKTAVVEYYSDNGVFPKNNASAGVASASEIV
GKYVAKVDVSGNTITSTMKTSGVNKDISGATLVLEGAQKSGSFTWTCKAGSSNGVKDKFLPSSCRAK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKTAVVEYYSDNGVFPKNNASAGVASASEIV
GKYVAKVDVSGNTITSTMKTSGVNKDISGATLVLEGAQKSGSFTWTCKAGSSNGVKDKFLPSSCRAK
Nucleotide
Download Length: 444 bp
>NTDB_id=1124040 EL305_RS10215 WP_002226857.1 1712642..1713085(-) (pilE) [Neisseria meningitidis strain NCTC12163]
ATGAAAGCAATCCAAAAAGGTTTCACTCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGTGCCCAAATGTCCGAAGCCCTGACTTTGGCGGAAGGTCAAAAAACCGCAG
TGGTCGAGTATTATTCCGACAACGGCGTGTTCCCGAAAAACAATGCTTCTGCGGGTGTTGCCAGTGCTTCTGAGATTGTA
GGTAAGTATGTGGCTAAGGTAGACGTTTCGGGTAATACCATTACGTCTACAATGAAAACTTCCGGTGTAAACAAAGATAT
CAGCGGAGCAACCCTTGTACTGGAAGGCGCGCAAAAATCTGGCTCGTTCACGTGGACTTGTAAAGCGGGTTCTTCAAATG
GTGTGAAAGACAAATTCCTGCCGTCTTCCTGCCGCGCCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACTCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGTGCCCAAATGTCCGAAGCCCTGACTTTGGCGGAAGGTCAAAAAACCGCAG
TGGTCGAGTATTATTCCGACAACGGCGTGTTCCCGAAAAACAATGCTTCTGCGGGTGTTGCCAGTGCTTCTGAGATTGTA
GGTAAGTATGTGGCTAAGGTAGACGTTTCGGGTAATACCATTACGTCTACAATGAAAACTTCCGGTGTAAACAAAGATAT
CAGCGGAGCAACCCTTGTACTGGAAGGCGCGCAAAAATCTGGCTCGTTCACGTGGACTTGTAAAGCGGGTTCTTCAAATG
GTGTGAAAGACAAATTCCTGCCGTCTTCCTGCCGCGCCAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
56.522 |
100 |
0.619 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
57.595 |
100 |
0.619 |
| pilA/pilA1 | Eikenella corrodens VA1 |
44.654 |
100 |
0.483 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
37.234 |
100 |
0.476 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.922 |
100 |
0.442 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
43.75 |
97.959 |
0.429 |
| pilA2 | Legionella pneumophila str. Paris |
43.662 |
96.599 |
0.422 |
| comP | Acinetobacter baylyi ADP1 |
41.333 |
100 |
0.422 |
| pilA | Acinetobacter baumannii strain A118 |
39.073 |
100 |
0.401 |
| pilA | Pseudomonas aeruginosa PAK |
36.129 |
100 |
0.381 |