Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | EL297_RS12350 | Genome accession | NZ_LR134525 |
| Coordinates | 2084368..2084799 (-) | Length | 143 a.a. |
| NCBI ID | WP_002249229.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain NCTC10025 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2079368..2089799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL297_RS12335 (NCTC10025_02083) | - | 2080105..2082141 (+) | 2037 | WP_002246738.1 | M3 family metallopeptidase | - |
| EL297_RS12340 (NCTC10025_02084) | - | 2082417..2082983 (-) | 567 | WP_002245810.1 | manganese efflux pump MntP family protein | - |
| EL297_RS12345 (NCTC10025_02086) | - | 2083435..2083935 (-) | 501 | WP_002220237.1 | REP-associated tyrosine transposase | - |
| EL297_RS12350 (NCTC10025_02087) | pilE | 2084368..2084799 (-) | 432 | WP_002249229.1 | pilin | Machinery gene |
| EL297_RS12370 (NCTC10025_02088) | katA | 2086154..2087668 (-) | 1515 | WP_002218620.1 | catalase KatA | - |
| EL297_RS12375 (NCTC10025_02089) | - | 2088016..2088867 (+) | 852 | WP_002245813.1 | RNA polymerase sigma-54 factor | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 15059.42 Da Isoelectric Point: 9.3697
>NTDB_id=1123949 EL297_RS12350 WP_002249229.1 2084368..2084799(-) (pilE) [Neisseria meningitidis strain NCTC10025]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKTAVVEYYSDKGTFPKNNASAGIASASEIT
GKYVAKVEVSGATITSTMKTQGVNKDISGATLVLEGKQNSGSFEWTCKAGSVKAKFLPSICRQ
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKTAVVEYYSDKGTFPKNNASAGIASASEIT
GKYVAKVEVSGATITSTMKTQGVNKDISGATLVLEGKQNSGSFEWTCKAGSVKAKFLPSICRQ
Nucleotide
Download Length: 432 bp
>NTDB_id=1123949 EL297_RS12350 WP_002249229.1 2084368..2084799(-) (pilE) [Neisseria meningitidis strain NCTC10025]
ATGAAAGCAATCCAAAAAGGTTTCACTCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCCGAAGGTCAAAAAACCGCAG
TGGTCGAGTATTATTCCGACAAAGGCACATTCCCGAAAAACAATGCTTCCGCAGGTATTGCCAGTGCTTCTGAGATTACA
GGTAAGTATGTGGCTAAGGTAGAAGTTTCGGGTGCTACCATTACTTCTACAATGAAAACTCAGGGTGTAAACAAAGACAT
CAGCGGCGCAACCTTGGTACTGGAAGGCAAACAAAACTCAGGCTCGTTCGAGTGGACTTGTAAAGCAGGTTCTGTAAAAG
CAAAATTCTTGCCATCTATCTGCCGCCAATAA
ATGAAAGCAATCCAAAAAGGTTTCACTCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCCGAAGGTCAAAAAACCGCAG
TGGTCGAGTATTATTCCGACAAAGGCACATTCCCGAAAAACAATGCTTCCGCAGGTATTGCCAGTGCTTCTGAGATTACA
GGTAAGTATGTGGCTAAGGTAGAAGTTTCGGGTGCTACCATTACTTCTACAATGAAAACTCAGGGTGTAAACAAAGACAT
CAGCGGCGCAACCTTGGTACTGGAAGGCAAACAAAACTCAGGCTCGTTCGAGTGGACTTGTAAAGCAGGTTCTGTAAAAG
CAAAATTCTTGCCATCTATCTGCCGCCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
57.233 |
100 |
0.636 |
| pilE | Neisseria gonorrhoeae MS11 |
56.25 |
100 |
0.629 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
36.17 |
100 |
0.476 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.401 |
100 |
0.455 |
| comP | Acinetobacter baylyi ADP1 |
42.953 |
100 |
0.448 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
36.905 |
100 |
0.434 |
| pilA2 | Legionella pneumophila str. Paris |
43.165 |
97.203 |
0.42 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
43.165 |
97.203 |
0.42 |
| pilA | Acinetobacter baumannii strain A118 |
39.716 |
98.601 |
0.392 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
37.063 |
100 |
0.371 |