Detailed information NTG1121815

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: EL140_RS00840
• Genome accession: NZ_LR134336
• Coordinates: 154682..155116 (+)
• Length: 144 a.a.
• NCBI ID: WP_001180060.1
• Uniprot ID: -
• Organism: Streptococcus oralis ATCC 35037 strain NCTC 11427
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 149682..160116

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL140_RS00815 (NCTC11427_00156)	nagA	150753..151904 (+)	1152	WP_001134442.1	N-acetylglucosamine-6-phosphate deacetylase	-
EL140_RS00820 (NCTC11427_00157)	-	152062..152427 (+)	366	WP_000286399.1	DUF1033 family protein	-
EL140_RS00825 (NCTC11427_00158)	comGA/cglA/cilD	152489..153430 (+)	942	WP_000249583.1	competence type IV pilus ATPase ComGA	Machinery gene
EL140_RS00830 (NCTC11427_00159)	comGB/cglB	153378..154394 (+)	1017	WP_002875106.1	competence type IV pilus assembly protein ComGB	Machinery gene
EL140_RS00835 (NCTC11427_00160)	comGC/cglC	154396..154719 (+)	324	WP_000735794.1	competence type IV pilus major pilin ComGC	Machinery gene
EL140_RS00840 (NCTC11427_00161)	comGD/cglD	154682..155116 (+)	435	WP_001180060.1	competence type IV pilus minor pilin ComGD	Machinery gene
EL140_RS00845 (NCTC11427_00162)	comGE/cglE	155079..155381 (+)	303	WP_000413369.1	competence type IV pilus minor pilin ComGE	Machinery gene
EL140_RS00850 (NCTC11427_00163)	comGF/cglF	155344..155805 (+)	462	WP_002875275.1	competence type IV pilus minor pilin ComGF	Machinery gene
EL140_RS00855 (NCTC11427_00164)	comGG/cglG	155783..156196 (+)	414	WP_000265647.1	competence type IV pilus minor pilin ComGG	Machinery gene
EL140_RS00860 (NCTC11427_00165)	-	156229..156816 (+)	588	WP_000679790.1	class I SAM-dependent methyltransferase	-
EL140_RS00865 (NCTC11427_00166)	comYH	156877..157830 (+)	954	WP_000345144.1	class I SAM-dependent methyltransferase	Machinery gene
EL140_RS00870 (NCTC11427_00167)	-	157882..159072 (+)	1191	WP_000167789.1	acetate kinase	-
EL140_RS00875 (NCTC11427_00168)	rnpA	159222..159593 (+)	372	WP_000748120.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15945.44 Da
• Isoelectric Point: 10.3971

>NTDB_id=1121815 EL140_RS00840 WP_001180060.1 154682..155116(+) (comGD/cglD) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILGLGLSGSVQSSFAAVEEQIFFMEFEELYRETQKRSLASQQKTSLNLDGQT
ISNGSQKLTVPKEIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGVIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=1121815 EL140_RS00840 WP_001180060.1 154682..155116(+) (comGD/cglD) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACCATGCTGGAAAGTCTCTTAGTTTTGGGACTTGT
GAGTATCCTTGGTTTAGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCGGCGGTAGAGGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATAGGGAAACGCAAAAACGCAGTCTAGCCAGTCAGCAAAAGACCAGTCTGAACTTAGATGGGCAGACG
ATCAGCAATGGCAGTCAAAAGTTGACCGTTCCTAAAGAAATTCAGGCGCCATCAGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCGTCCCTGGCTAAGGTTGAATTTCAGACTAGCAAAGGAGTGATTCGCTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACTAAAAATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	91.667	100	0.917
comGD/cglD	Streptococcus mitis SK321	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae Rx1	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae D39	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae R6	93.985	92.361	0.868
comGD/cglD	Streptococcus pneumoniae TIGR4	93.233	92.361	0.861
comYD	Streptococcus gordonii str. Challis substr. CH1	56.589	89.583	0.507
comYD	Streptococcus mutans UA140	48.062	89.583	0.431
comYD	Streptococcus mutans UA159	48.062	89.583	0.431