Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG/cglG   Type   Machinery gene
Locus tag   EL140_RS00855 Genome accession   NZ_LR134336
Coordinates   155783..156196 (+) Length   137 a.a.
NCBI ID   WP_000265647.1    Uniprot ID   A0A1X1HAR6
Organism   Streptococcus oralis ATCC 35037 strain NCTC 11427     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 150783..161196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL140_RS00820 (NCTC11427_00157) - 152062..152427 (+) 366 WP_000286399.1 DUF1033 family protein -
  EL140_RS00825 (NCTC11427_00158) comGA/cglA/cilD 152489..153430 (+) 942 WP_000249583.1 competence type IV pilus ATPase ComGA Machinery gene
  EL140_RS00830 (NCTC11427_00159) comGB/cglB 153378..154394 (+) 1017 WP_002875106.1 competence type IV pilus assembly protein ComGB Machinery gene
  EL140_RS00835 (NCTC11427_00160) comGC/cglC 154396..154719 (+) 324 WP_000735794.1 competence type IV pilus major pilin ComGC Machinery gene
  EL140_RS00840 (NCTC11427_00161) comGD/cglD 154682..155116 (+) 435 WP_001180060.1 competence type IV pilus minor pilin ComGD Machinery gene
  EL140_RS00845 (NCTC11427_00162) comGE/cglE 155079..155381 (+) 303 WP_000413369.1 competence type IV pilus minor pilin ComGE Machinery gene
  EL140_RS00850 (NCTC11427_00163) comGF/cglF 155344..155805 (+) 462 WP_002875275.1 competence type IV pilus minor pilin ComGF Machinery gene
  EL140_RS00855 (NCTC11427_00164) comGG/cglG 155783..156196 (+) 414 WP_000265647.1 competence type IV pilus minor pilin ComGG Machinery gene
  EL140_RS00860 (NCTC11427_00165) - 156229..156816 (+) 588 WP_000679790.1 class I SAM-dependent methyltransferase -
  EL140_RS00865 (NCTC11427_00166) comYH 156877..157830 (+) 954 WP_000345144.1 class I SAM-dependent methyltransferase Machinery gene
  EL140_RS00870 (NCTC11427_00167) - 157882..159072 (+) 1191 WP_000167789.1 acetate kinase -
  EL140_RS00875 (NCTC11427_00168) rnpA 159222..159593 (+) 372 WP_000748120.1 ribonuclease P protein component -
  EL140_RS00880 (NCTC11427_00169) - 159568..160395 (+) 828 WP_000728097.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 137 a.a.        Molecular weight: 15762.19 Da        Isoelectric Point: 10.5741

>NTDB_id=1121818 EL140_RS00855 WP_000265647.1 155783..156196(+) (comGG/cglG) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
MWKKQKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHHKDFALNKEKLIAFAMAKRSKDKAEQESGERVFNLGKVRYQNTK
TGFATSVRMNKGNYEFLFPTMKTQEKKTAKKEEVATDSSNQAEKKKSEEKSEKKDNS

Nucleotide


Download         Length: 414 bp        

>NTDB_id=1121818 EL140_RS00855 WP_000265647.1 155783..156196(+) (comGG/cglG) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
GTGTGGAAAAAACAAAAAGTTAAGGCAGGCGTTCTTTTATATGCAGTCACCATGGCAGCCATCTTTAGTCTGTTGTTGCA
GTTTTATTTAAATCGGCAAGTCGCCCATCACAAAGACTTTGCCCTAAACAAAGAAAAGTTGATCGCTTTTGCCATGGCCA
AGCGAAGTAAGGATAAGGCTGAGCAAGAAAGTGGAGAACGAGTCTTTAACTTAGGAAAAGTCAGATATCAAAATACGAAA
ACAGGTTTTGCAACAAGTGTTCGTATGAATAAGGGCAACTATGAATTTCTCTTTCCTACGATGAAAACCCAAGAAAAGAA
AACAGCTAAAAAGGAAGAGGTAGCGACTGATTCAAGCAATCAAGCAGAGAAGAAAAAATCAGAAGAGAAGTCTGAAAAGA
AAGACAATTCCTAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1HAR6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG/cglG Streptococcus mitis SK321

77.372

100

0.774

  comGG/cglG Streptococcus mitis NCTC 12261

76.23

89.051

0.679

  comGG/cglG Streptococcus pneumoniae Rx1

76.923

85.401

0.657

  comGG/cglG Streptococcus pneumoniae D39

76.923

85.401

0.657

  comGG/cglG Streptococcus pneumoniae R6

76.923

85.401

0.657

  comGG/cglG Streptococcus pneumoniae TIGR4

76.923

85.401

0.657


Multiple sequence alignment