Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EL078_RS00780 | Genome accession | NZ_LR134282 |
| Coordinates | 113690..114085 (+) | Length | 131 a.a. |
| NCBI ID | WP_021141449.1 | Uniprot ID | A0A1G9M4F1 |
| Organism | Streptococcus equinus strain NCTC8140 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 108690..119085
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL078_RS00745 (NCTC8140_00148) | - | 108834..109469 (+) | 636 | WP_027968028.1 | CPBP family intramembrane glutamic endopeptidase | - |
| EL078_RS00750 (NCTC8140_00149) | proC | 109521..110291 (-) | 771 | WP_024344501.1 | pyrroline-5-carboxylate reductase | - |
| EL078_RS00755 (NCTC8140_00150) | pepA | 110353..111420 (-) | 1068 | WP_024344502.1 | glutamyl aminopeptidase | - |
| EL078_RS00760 (NCTC8140_00151) | - | 111537..111830 (+) | 294 | WP_027968030.1 | DUF4651 domain-containing protein | - |
| EL078_RS00765 (NCTC8140_00152) | - | 111823..112140 (+) | 318 | WP_021141448.1 | thioredoxin family protein | - |
| EL078_RS00770 (NCTC8140_00153) | ytpR | 112149..112775 (+) | 627 | WP_003067880.1 | YtpR family tRNA-binding protein | - |
| EL078_RS00775 (NCTC8140_00154) | - | 112862..113578 (-) | 717 | WP_045798317.1 | class I SAM-dependent methyltransferase | - |
| EL078_RS00780 (NCTC8140_00155) | ssbA | 113690..114085 (+) | 396 | WP_021141449.1 | single-stranded DNA-binding protein | Machinery gene |
| EL078_RS00785 (NCTC8140_00156) | - | 114265..115065 (+) | 801 | WP_021141450.1 | Cof-type HAD-IIB family hydrolase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14847.84 Da Isoelectric Point: 5.7866
>NTDB_id=1119955 EL078_RS00780 WP_021141449.1 113690..114085(+) (ssbA) [Streptococcus equinus strain NCTC8140]
MYNKVIMIGRLTAQPELVTTANDKSVTRVTLAVNRRFKSQNGEREADFISLVVWGRLAETLVSYAGKGSLLSVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF
MYNKVIMIGRLTAQPELVTTANDKSVTRVTLAVNRRFKSQNGEREADFISLVVWGRLAETLVSYAGKGSLLSVDGELRTR
KYEKDGHTNYVTEVLCHSFQLLESRAQRAMRENNVANDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1119955 EL078_RS00780 WP_021141449.1 113690..114085(+) (ssbA) [Streptococcus equinus strain NCTC8140]
ATGTACAATAAAGTAATTATGATTGGGCGCTTGACGGCGCAACCTGAACTTGTGACGACAGCTAACGATAAAAGTGTTAC
ACGTGTAACACTTGCGGTCAATCGACGTTTTAAATCGCAAAATGGTGAGCGTGAGGCTGATTTCATTTCGCTTGTGGTAT
GGGGACGTTTGGCAGAAACGCTTGTGTCTTATGCGGGCAAAGGCAGCTTACTTTCTGTTGATGGCGAACTTCGCACACGC
AAGTACGAAAAAGATGGTCACACGAATTATGTGACAGAAGTGCTTTGTCATTCTTTTCAACTCTTAGAAAGTCGCGCACA
ACGTGCTATGCGAGAAAATAATGTGGCAAATGATTTGGCAGATTTAGTTCTGGAAGAGGAGGAATTGCCATTTTAG
ATGTACAATAAAGTAATTATGATTGGGCGCTTGACGGCGCAACCTGAACTTGTGACGACAGCTAACGATAAAAGTGTTAC
ACGTGTAACACTTGCGGTCAATCGACGTTTTAAATCGCAAAATGGTGAGCGTGAGGCTGATTTCATTTCGCTTGTGGTAT
GGGGACGTTTGGCAGAAACGCTTGTGTCTTATGCGGGCAAAGGCAGCTTACTTTCTGTTGATGGCGAACTTCGCACACGC
AAGTACGAAAAAGATGGTCACACGAATTATGTGACAGAAGTGCTTTGTCATTCTTTTCAACTCTTAGAAAGTCGCGCACA
ACGTGCTATGCGAGAAAATAATGTGGCAAATGATTTGGCAGATTTAGTTCTGGAAGAGGAGGAATTGCCATTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.153 |
100 |
0.802 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
78.626 |
100 |
0.786 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
78.626 |
100 |
0.786 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
78.626 |
100 |
0.786 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis SK321 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
62.281 |
87.023 |
0.542 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
51.887 |
80.916 |
0.42 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
45.299 |
89.313 |
0.405 |