Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | EL071_RS11625 | Genome accession | NZ_LR134265 |
| Coordinates | 2226331..2226726 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282447.1 | Uniprot ID | A0AAV3JLT6 |
| Organism | Streptococcus agalactiae strain NCTC8184 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2221331..2231726
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL071_RS11600 (NCTC8184_02314) | lrgB | 2221715..2222443 (-) | 729 | WP_000421727.1 | antiholin-like protein LrgB | - |
| EL071_RS11605 (NCTC8184_02315) | - | 2222445..2222900 (-) | 456 | WP_000683316.1 | CidA/LrgA family protein | - |
| EL071_RS11610 (NCTC8184_02316) | - | 2223070..2223810 (-) | 741 | WP_000697630.1 | LytTR family transcriptional regulator DNA-binding domain-containing protein | - |
| EL071_RS11615 (NCTC8184_02317) | - | 2223791..2225536 (-) | 1746 | WP_000930334.1 | LytS/YhcK type 5TM receptor domain-containing protein | - |
| EL071_RS11620 (NCTC8184_02318) | - | 2225563..2226207 (-) | 645 | WP_000416617.1 | HAD family hydrolase | - |
| EL071_RS11625 (NCTC8184_02319) | ssbA | 2226331..2226726 (-) | 396 | WP_000282447.1 | single-stranded DNA-binding protein | Machinery gene |
| EL071_RS11630 (NCTC8184_02320) | - | 2226807..2227523 (+) | 717 | WP_000186176.1 | class I SAM-dependent methyltransferase | - |
| EL071_RS11635 (NCTC8184_02321) | ytpR | 2227577..2228203 (-) | 627 | WP_000578324.1 | YtpR family tRNA-binding protein | - |
| EL071_RS11640 (NCTC8184_02322) | - | 2228236..2228559 (-) | 324 | WP_000602780.1 | thioredoxin family protein | - |
| EL071_RS11645 (NCTC8184_02323) | - | 2228556..2228840 (-) | 285 | WP_000791272.1 | DUF4651 domain-containing protein | - |
| EL071_RS11650 (NCTC8184_02324) | - | 2229001..2229240 (+) | 240 | WP_115356964.1 | hypothetical protein | - |
| EL071_RS11655 (NCTC8184_02325) | pepA | 2229425..2230492 (+) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
| EL071_RS11660 (NCTC8184_02326) | proC | 2230562..2231332 (+) | 771 | WP_001869147.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14774.80 Da Isoelectric Point: 7.0189
>NTDB_id=1119531 EL071_RS11625 WP_000282447.1 2226331..2226726(-) (ssbA) [Streptococcus agalactiae strain NCTC8184]
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
MYNKVIMIGRLTAKPEMVKTPTDKSVTRATVAVNRRFKGSNGEREADFINVVMWGRLAETLASYGTKGSLISIDGELRTR
KYEKDGQTHYITEVLASSFQLLESRAQRAMRENNVSGDLSDLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1119531 EL071_RS11625 WP_000282447.1 2226331..2226726(-) (ssbA) [Streptococcus agalactiae strain NCTC8184]
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGTTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAATGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
ATGTATAATAAAGTTATTATGATTGGGCGTCTAACAGCAAAGCCTGAGATGGTAAAAACACCAACTGACAAGTCAGTAAC
GCGTGCAACTGTTGCTGTTAATAGACGCTTTAAAGGAAGTAATGGTGAGCGTGAAGCAGATTTTATTAATGTGGTTATGT
GGGGTCGTCTAGCGGAAACCCTTGCGAGCTATGGGACAAAGGGCTCTTTAATTTCAATAGATGGTGAATTGCGTACGCGC
AAGTACGAAAAGGATGGTCAAACGCACTATATCACTGAAGTATTAGCATCATCATTTCAGTTGTTAGAAAGCCGTGCCCA
ACGTGCTATGCGTGAAAATAATGTTTCTGGTGATTTGTCAGATTTAGTATTGGAAGAAGAGGAGCTCCCCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Streptococcus mutans UA159 |
80.916 |
100 |
0.809 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
77.863 |
100 |
0.779 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
77.099 |
100 |
0.771 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
77.099 |
100 |
0.771 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
76.336 |
100 |
0.763 |
| ssbB/cilA | Streptococcus mitis SK321 |
76.336 |
100 |
0.763 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
60.526 |
87.023 |
0.527 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.018 |
86.26 |
0.397 |