Detailed information NTG1118255

Bioinformatically predicted

Overview

• Name: comYC
• Type: Machinery gene
• Locus tag: ELZ51_RS00860
• Genome accession: NZ_LR134094
• Coordinates: 132154..132480 (+)
• Length: 108 a.a.
• NCBI ID: WP_115246891.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 127154..137480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ELZ51_RS00845 (NCTC4669_00179)	-	129798..130163 (+)	366	WP_126425649.1	DUF1033 family protein	-
ELZ51_RS00850 (NCTC4669_00180)	comYA	130244..131185 (+)	942	WP_126425651.1	competence type IV pilus ATPase ComGA	Machinery gene
ELZ51_RS00855 (NCTC4669_00181)	comYB	131121..132152 (+)	1032	WP_126427580.1	competence type IV pilus assembly protein ComGB	Machinery gene
ELZ51_RS00860 (NCTC4669_00182)	comYC	132154..132480 (+)	327	WP_115246891.1	competence type IV pilus major pilin ComGC	Machinery gene
ELZ51_RS00865 (NCTC4669_00183)	comGD	132455..132883 (+)	429	WP_115252504.1	competence type IV pilus minor pilin ComGD	-
ELZ51_RS00870 (NCTC4669_00184)	comGE	132840..133136 (+)	297	WP_003061797.1	competence type IV pilus minor pilin ComGE	-
ELZ51_RS00875 (NCTC4669_00185)	comGF	133117..133557 (+)	441	WP_003049266.1	competence type IV pilus minor pilin ComGF	-
ELZ51_RS00880 (NCTC4669_00186)	comGG	133580..133909 (+)	330	WP_226316716.1	competence type IV pilus minor pilin ComGG	-
ELZ51_RS00885 (NCTC4669_00187)	comYH	133972..134925 (+)	954	WP_126425653.1	class I SAM-dependent methyltransferase	Machinery gene
ELZ51_RS00890 (NCTC4669_00188)	-	134984..136180 (+)	1197	WP_003049273.1	acetate kinase	-
ELZ51_RS00895 (NCTC4669_00189)	-	136490..136696 (+)	207	WP_003049274.1	helix-turn-helix transcriptional regulator	-
ELZ51_RS00900 (NCTC4669_00190)	-	136744..137058 (+)	315	Protein_131	CPBP family intramembrane glutamic endopeptidase	-

Sequence

Protein

• Length: 108 a.a.
• Molecular weight: 12399.39 Da
• Isoelectric Point: 9.6248

>NTDB_id=1118255 ELZ51_RS00860 WP_115246891.1 132154..132480(+) (comYC) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
MKNQWKPLRQYQLQAFTLLEMLLVILVISVLMLLFVPNLSKQKDRVTETGNAAVVKLVENQAELYELSQGSKPSLQQLKN
DGSITDKQVKAYTDYYEKHTNEKSSLKP

Nucleotide

• Length: 327 bp

>NTDB_id=1118255 ELZ51_RS00860 WP_115246891.1 132154..132480(+) (comYC) [Streptococcus dysgalactiae subsp. dysgalactiae strain NCTC4669]
ATGAAAAACCAATGGAAACCATTACGGCAATACCAACTACAAGCTTTCACACTTCTAGAAATGTTGCTGGTGATTTTAGT
CATCAGTGTCTTAATGCTCTTATTTGTACCTAATTTAAGCAAACAAAAAGATAGGGTTACCGAAACAGGAAATGCTGCTG
TTGTCAAATTAGTGGAGAATCAAGCAGAGTTGTACGAATTATCGCAAGGATCAAAACCAAGTTTACAACAGTTGAAGAAC
GATGGCAGTATTACAGATAAACAGGTAAAAGCTTACACAGACTATTACGAAAAACATACCAATGAAAAGTCCAGTCTTAA
ACCTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comYC	Streptococcus gordonii str. Challis substr. CH1	57.426	93.519	0.537
comGC	Lactococcus lactis subsp. cremoris KW2	52.336	99.074	0.519
comGC/cglC	Streptococcus mitis SK321	55.556	91.667	0.509
comGC/cglC	Streptococcus pneumoniae TIGR4	54.545	91.667	0.5
comGC/cglC	Streptococcus mitis NCTC 12261	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae Rx1	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae D39	54.545	91.667	0.5
comGC/cglC	Streptococcus pneumoniae R6	54.545	91.667	0.5
comYC	Streptococcus mutans UA159	55.319	87.037	0.481
comYC	Streptococcus mutans UA140	55.319	87.037	0.481
comYC	Streptococcus suis isolate S10	50.562	82.407	0.417