Detailed information NTG1115960

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: E0E12_RS08240
• Genome accession: NZ_LR027876
• Coordinates: 1627275..1627586 (-)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain JKD6009 isolate JKD6009
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1622275..1632586

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E0E12_RS08205	gcvPA	1622777..1624123 (-)	1347	WP_000019684.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
E0E12_RS08210	gcvT	1624143..1625234 (-)	1092	WP_000093351.1	glycine cleavage system aminomethyltransferase GcvT	-
E0E12_RS08215	-	1625393..1625917 (-)	525	WP_001015117.1	shikimate kinase	-
E0E12_RS08220	-	1625907..1626053 (-)	147	WP_001789879.1	hypothetical protein	-
E0E12_RS08225	comGF	1626150..1626632 (-)	483	WP_014532870.1	competence type IV pilus minor pilin ComGF	Machinery gene
E0E12_RS08230	comGE	1626565..1626864 (-)	300	WP_000844414.1	hypothetical protein	Machinery gene
E0E12_RS08235	comGD	1626851..1627297 (-)	447	WP_001790850.1	competence type IV pilus minor pilin ComGD	Machinery gene
E0E12_RS08240	comGC	1627275..1627586 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
E0E12_RS08245	comGB	1627600..1628670 (-)	1071	WP_000775708.1	competence type IV pilus assembly protein ComGB	Machinery gene
E0E12_RS08250	comGA	1628642..1629616 (-)	975	WP_000697228.1	competence type IV pilus ATPase ComGA	Machinery gene
E0E12_RS08255	-	1629668..1630291 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
E0E12_RS08260	-	1630288..1630617 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
E0E12_RS08265	-	1630617..1631603 (-)	987	WP_000161314.1	ROK family glucokinase	-
E0E12_RS08270	-	1631600..1631803 (-)	204	WP_000087561.1	YqgQ family protein	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1115960 E0E12_RS08240 WP_000472256.1 1627275..1627586(-) (comGC) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1115960 E0E12_RS08240 WP_000472256.1 1627275..1627586(-) (comGC) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATCACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369