Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E0E12_RS08230 | Genome accession | NZ_LR027876 |
| Coordinates | 1626565..1626864 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844414.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain JKD6009 isolate JKD6009 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1621565..1631864
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E12_RS08205 | gcvPA | 1622777..1624123 (-) | 1347 | WP_000019684.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| E0E12_RS08210 | gcvT | 1624143..1625234 (-) | 1092 | WP_000093351.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E0E12_RS08215 | - | 1625393..1625917 (-) | 525 | WP_001015117.1 | shikimate kinase | - |
| E0E12_RS08220 | - | 1625907..1626053 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| E0E12_RS08225 | comGF | 1626150..1626632 (-) | 483 | WP_014532870.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E0E12_RS08230 | comGE | 1626565..1626864 (-) | 300 | WP_000844414.1 | hypothetical protein | Machinery gene |
| E0E12_RS08235 | comGD | 1626851..1627297 (-) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E0E12_RS08240 | comGC | 1627275..1627586 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E0E12_RS08245 | comGB | 1627600..1628670 (-) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E0E12_RS08250 | comGA | 1628642..1629616 (-) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E0E12_RS08255 | - | 1629668..1630291 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E0E12_RS08260 | - | 1630288..1630617 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E0E12_RS08265 | - | 1630617..1631603 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E0E12_RS08270 | - | 1631600..1631803 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11111.24 Da Isoelectric Point: 9.9215
>NTDB_id=1115958 E0E12_RS08230 WP_000844414.1 1626565..1626864(-) (comGE) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDMKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDMKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1115958 E0E12_RS08230 WP_000844414.1 1626565..1626864(-) (comGE) [Staphylococcus aureus strain JKD6009 isolate JKD6009]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATGAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATGAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |