Detailed information NTG1114589

Bioinformatically predicted

Overview

• Name: ssbB/cilA
• Type: Machinery gene
• Locus tag: A66_RS08605
• Genome accession: NZ_LN847353
• Coordinates: 1639931..1640326 (-)
• Length: 131 a.a.
• NCBI ID: WP_053039748.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain A66
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1634931..1645326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A66_RS08580 (A66_01709)	recX	1635560..1636336 (+)	777	WP_000705102.1	recombination regulator RecX	-
A66_RS08585 (A66_01710)	-	1636425..1636958 (+)	534	WP_000775321.1	DUF402 domain-containing protein	-
A66_RS08590 (A66_01711)	-	1637312..1637593 (-)	282	WP_078839683.1	hypothetical protein	-
A66_RS08595 (A66_01712)	groL	1637739..1639361 (-)	1623	WP_000031573.1	chaperonin GroEL	-
A66_RS08600 (A66_01713)	groES	1639377..1639661 (-)	285	WP_000917330.1	co-chaperone GroES	-
A66_RS08605 (A66_01714)	ssbB/cilA	1639931..1640326 (-)	396	WP_053039748.1	single-stranded DNA-binding protein	Machinery gene
A66_RS08610 (A66_01715)	-	1640404..1641165 (-)	762	WP_050215706.1	SDR family NAD(P)-dependent oxidoreductase	-
A66_RS08615 (A66_01716)	ytpR	1641207..1641833 (-)	627	WP_000578289.1	YtpR family tRNA-binding protein	-
A66_RS08620 (A66_01717)	-	1641849..1642166 (-)	318	WP_000615774.1	thioredoxin family protein	-
A66_RS08625 (A66_01718)	-	1642163..1642462 (-)	300	WP_001818001.1	DUF4651 domain-containing protein	-
A66_RS12800 (A66_01719)	-	1642556..1642687 (+)	132	WP_001811306.1	hypothetical protein	-
A66_RS13015	-	1642799..1642994 (-)	196	Protein_1672	cell wall-binding protein	-
A66_RS08640 (A66_01720)	-	1643155..1643829 (-)	675	WP_000725720.1	LiaF transmembrane domain-containing protein	-
A66_RS08645 (A66_01721)	-	1643834..1644280 (-)	447	Protein_1674	LytTR family DNA-binding domain-containing protein	-
A66_RS08650 (A66_01722)	-	1644394..1644897 (-)	504	WP_000800942.1	phosphatase PAP2 family protein	-
A66_RS08655 (A66_01723)	-	1644894..1645256 (-)	363	WP_000078805.1	DUF2200 domain-containing protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14953.94 Da
• Isoelectric Point: 5.9409

>NTDB_id=1114589 A66_RS08605 WP_053039748.1 1639931..1640326(-) (ssbB/cilA) [Streptococcus pneumoniae strain A66]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREVDFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1114589 A66_RS08605 WP_053039748.1 1639931..1640326(-) (ssbB/cilA) [Streptococcus pneumoniae strain A66]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCAGTAGC
GCGAGCAACTATCGCTGTCAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGTTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAATTATGTAACCGAAGTCCTTGTGACAGGATTCCAACTCTTGGAAAGTCGTGCCCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbB/cilA	Streptococcus pneumoniae D39	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae Rx1	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae R6	99.237	100	0.992
ssbB/cilA	Streptococcus pneumoniae TIGR4	98.473	100	0.985
ssbB/cilA	Streptococcus mitis SK321	97.71	100	0.977
ssbB/cilA	Streptococcus mitis NCTC 12261	97.71	100	0.977
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB	Streptococcus sobrinus strain NIDR 6715-7	69.466	100	0.695
ssbB	Lactococcus lactis subsp. cremoris KW2	58.929	85.496	0.504
ssbA	Bacillus subtilis subsp. subtilis str. 168	50	80.916	0.405
ssb	Latilactobacillus sakei subsp. sakei 23K	46.018	86.26	0.397