Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | AT689_RS04440 | Genome accession | NZ_LN831051 |
| Coordinates | 826850..827245 (+) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain NCTC7465 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 821850..832245
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT689_RS04395 (ERS445053_00858) | - | 821984..822346 (+) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
| AT689_RS04400 (ERS445053_00859) | - | 822343..822846 (+) | 504 | WP_000800942.1 | phosphatase PAP2 family protein | - |
| AT689_RS04405 (ERS445053_00860) | - | 822960..823406 (+) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| AT689_RS04410 (ERS445053_00861) | - | 823412..824086 (+) | 675 | WP_000725748.1 | hypothetical protein | - |
| AT689_RS04415 | - | 824247..824438 (+) | 192 | WP_001843938.1 | cell wall-binding repeat protein | - |
| AT689_RS13080 | - | 824463..824525 (+) | 63 | WP_219300018.1 | hypothetical protein | - |
| AT689_RS04420 (ERS445053_00862) | - | 824723..825022 (+) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| AT689_RS04425 (ERS445053_00863) | - | 825019..825336 (+) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| AT689_RS04430 (ERS445053_00864) | ytpR | 825352..825978 (+) | 627 | WP_000578316.1 | YtpR family tRNA-binding protein | - |
| AT689_RS04435 (ERS445053_00865) | - | 826011..826772 (+) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| AT689_RS04440 (ERS445053_00866) | ssbB/cilA | 826850..827245 (+) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| AT689_RS04445 (ERS445053_00867) | groES | 827515..827799 (+) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| AT689_RS04450 (ERS445053_00868) | groL | 827815..829437 (+) | 1623 | WP_000031573.1 | chaperonin GroEL | - |
| AT689_RS12965 | - | 829575..830330 (+) | 756 | Protein_846 | epoxyqueuosine reductase QueH | - |
| AT689_RS04460 (ERS445053_00871) | - | 830770..831303 (-) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| AT689_RS04465 (ERS445053_00872) | recX | 831392..832168 (-) | 777 | WP_000705093.1 | recombination regulator RecX | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=1114382 AT689_RS04440 WP_000282467.1 826850..827245(+) (ssbB/cilA) [Streptococcus pneumoniae strain NCTC7465]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1114382 AT689_RS04440 WP_000282467.1 826850..827245(+) (ssbB/cilA) [Streptococcus pneumoniae strain NCTC7465]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTAACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTAGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |