Detailed information NTG0109819

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ABXG87_RS09310
• Genome accession: NZ_AP031488
• Coordinates: 1971030..1971422 (-)
• Length: 130 a.a.
• NCBI ID: WP_037601494.1
• Uniprot ID: A0A074JHY3
• Organism: Streptococcus salivarius strain NBRC 13956
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1966030..1976422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXG87_RS09270 (Ssa13956_17650)	dapD	1966101..1966799 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
ABXG87_RS09275 (Ssa13956_17660)	-	1966885..1967637 (-)	753	WP_013991246.1	HAD family hydrolase	-
ABXG87_RS09280 (Ssa13956_17670)	-	1967751..1968590 (-)	840	WP_353551566.1	methyltransferase domain-containing protein	-
ABXG87_RS09290 (Ssa13956_17680)	-	1969011..1969169 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ABXG87_RS09295 (Ssa13956_17690)	-	1969189..1969356 (+)	168	WP_002887002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ABXG87_RS09300 (Ssa13956_17700)	-	1969404..1969655 (+)	252	WP_353551567.1	hypothetical protein	-
ABXG87_RS09305 (Ssa13956_17710)	tadA	1969742..1970260 (-)	519	WP_014635105.1	tRNA adenosine(34) deaminase TadA	-
ABXG87_RS09310 (Ssa13956_17720)	ssbA	1971030..1971422 (-)	393	WP_037601494.1	single-stranded DNA-binding protein	Machinery gene
ABXG87_RS09315 (Ssa13956_17730)	-	1971853..1972530 (-)	678	WP_353551569.1	type II CAAX endopeptidase family protein	-
ABXG87_RS09320 (Ssa13956_17740)	ytpR	1972795..1973418 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
ABXG87_RS09325 (Ssa13956_17750)	-	1973450..1973974 (-)	525	WP_353551571.1	hypothetical protein	-
ABXG87_RS09330 (Ssa13956_17760)	-	1973978..1974292 (-)	315	WP_070475326.1	thioredoxin family protein	-
ABXG87_RS09335 (Ssa13956_17770)	-	1974289..1974573 (-)	285	WP_003091918.1	DUF4651 domain-containing protein	-
ABXG87_RS09340 (Ssa13956_17780)	pepA	1974673..1975740 (+)	1068	WP_353551572.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14787.72 Da
• Isoelectric Point: 5.9275

>NTDB_id=109819 ABXG87_RS09310 WP_037601494.1 1971030..1971422(-) (ssbA) [Streptococcus salivarius strain NBRC 13956]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLVSYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=109819 ABXG87_RS09310 WP_037601494.1 1971030..1971422(-) (ssbA) [Streptococcus salivarius strain NBRC 13956]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTTAAGACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGTATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGGGAGCTTCGTACCCGT
AAGTACGATAAGGATGGTCAAACCCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

3D structure

• AlphaFold DB: A0A074JHY3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.153	100	0.808
ssbB	Streptococcus sobrinus strain NIDR 6715-7	77.099	100	0.777
ssbB/cilA	Streptococcus pneumoniae TIGR4	75.573	100	0.762
ssbB/cilA	Streptococcus mitis SK321	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae R6	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae Rx1	74.809	100	0.754
ssbB/cilA	Streptococcus pneumoniae D39	74.809	100	0.754
ssbB/cilA	Streptococcus mitis NCTC 12261	73.282	100	0.738
ssbB	Lactococcus lactis subsp. cremoris KW2	62.5	86.154	0.538
ssbA	Bacillus subtilis subsp. subtilis str. 168	47.17	81.538	0.385
ssb	Latilactobacillus sakei subsp. sakei 23K	46.226	81.538	0.377