Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | ACMXD4_RS00950 | Genome accession | NZ_CP180476 |
| Coordinates | 211050..212183 (+) | Length | 377 a.a. |
| NCBI ID | WP_033158298.1 | Uniprot ID | A0A2N0V4Z9 |
| Organism | Methylomonas sp. TEB | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 206050..217183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMXD4_RS00930 (ACMXD4_00930) | - | 207541..208491 (-) | 951 | WP_415879591.1 | DUF58 domain-containing protein | - |
| ACMXD4_RS00935 (ACMXD4_00935) | - | 208488..209393 (-) | 906 | WP_415879592.1 | AAA family ATPase | - |
| ACMXD4_RS00940 (ACMXD4_00940) | - | 209539..209880 (+) | 342 | WP_415879593.1 | TraR/DksA family transcriptional regulator | - |
| ACMXD4_RS00945 (ACMXD4_00945) | pilT | 209997..211034 (+) | 1038 | WP_101053853.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| ACMXD4_RS00950 (ACMXD4_00950) | pilU | 211050..212183 (+) | 1134 | WP_033158298.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| ACMXD4_RS00955 (ACMXD4_00955) | mltB | 212201..213382 (+) | 1182 | WP_033158297.1 | lytic murein transglycosylase B | - |
| ACMXD4_RS00960 (ACMXD4_00960) | - | 213883..214437 (-) | 555 | WP_129871319.1 | hypothetical protein | - |
| ACMXD4_RS00965 (ACMXD4_00965) | - | 214653..215189 (-) | 537 | WP_033158295.1 | REP-associated tyrosine transposase | - |
| ACMXD4_RS00970 (ACMXD4_00970) | - | 215308..216696 (-) | 1389 | WP_415878602.1 | IS4 family transposase | - |
Sequence
Protein
Download Length: 377 a.a. Molecular weight: 42046.36 Da Isoelectric Point: 6.6667
>NTDB_id=1095950 ACMXD4_RS00950 WP_033158298.1 211050..212183(+) (pilU) [Methylomonas sp. TEB]
MDFKALLALMVEKKASDLFITAGRPPSMKVNGKVVEVSKSVLTSEQTMMLVLSIMSQRQRDEFENTHECQFALSAHSLGR
FRVSAFTQRDSAGMVLRRIETTIPSAEELHLPPVLKELIMYKRGLVMFVGATGTGKSTSLAALIRHRNENSSGHIISIED
PIEFIHPHKGCIITQREVGLDTESFEVALKNTLRQAPDVILIGEVRSRDTMQHAITFAETGHLCVCTLHANNANQALDRI
LHFFPEEMHSQLFMDLSLNLRGIVAQQLIQRADGKGRYPAIEILLNTPLASDMIRKGEVHKLKELMKSSREHGMQTFDQA
LYDLYTAGKIGYDDALHAADSRNEVRLMIKLGAENVNFETAGMTLAENDDEGGSLFK
MDFKALLALMVEKKASDLFITAGRPPSMKVNGKVVEVSKSVLTSEQTMMLVLSIMSQRQRDEFENTHECQFALSAHSLGR
FRVSAFTQRDSAGMVLRRIETTIPSAEELHLPPVLKELIMYKRGLVMFVGATGTGKSTSLAALIRHRNENSSGHIISIED
PIEFIHPHKGCIITQREVGLDTESFEVALKNTLRQAPDVILIGEVRSRDTMQHAITFAETGHLCVCTLHANNANQALDRI
LHFFPEEMHSQLFMDLSLNLRGIVAQQLIQRADGKGRYPAIEILLNTPLASDMIRKGEVHKLKELMKSSREHGMQTFDQA
LYDLYTAGKIGYDDALHAADSRNEVRLMIKLGAENVNFETAGMTLAENDDEGGSLFK
Nucleotide
Download Length: 1134 bp
>NTDB_id=1095950 ACMXD4_RS00950 WP_033158298.1 211050..212183(+) (pilU) [Methylomonas sp. TEB]
ATGGACTTTAAAGCCCTATTGGCCCTGATGGTGGAAAAGAAAGCGTCCGACTTGTTCATCACCGCCGGCCGGCCGCCGTC
GATGAAAGTCAACGGCAAAGTCGTCGAAGTGTCCAAATCCGTTTTAACTAGCGAACAGACCATGATGCTGGTTCTCAGTA
TCATGTCGCAGCGCCAACGCGACGAGTTTGAAAACACTCACGAATGCCAGTTTGCCTTGAGTGCCCACAGTCTTGGCCGG
TTCCGGGTCAGTGCGTTTACCCAACGCGACTCGGCCGGCATGGTGTTGCGCCGCATCGAAACCACCATCCCCAGCGCAGA
GGAATTGCACCTGCCGCCGGTGTTGAAAGAACTGATCATGTACAAGCGCGGTCTGGTGATGTTTGTCGGTGCCACCGGTA
CCGGTAAATCAACCTCGCTGGCGGCCTTGATTCGGCACCGCAACGAAAACAGCAGCGGCCATATCATTTCCATTGAAGAC
CCTATCGAGTTTATCCATCCGCACAAGGGCTGCATCATCACCCAGCGCGAAGTGGGCCTGGATACCGAATCGTTTGAAGT
GGCGTTAAAAAACACCCTGCGCCAAGCGCCGGACGTAATCCTGATTGGCGAGGTCAGAAGCCGGGACACCATGCAACATG
CGATCACCTTCGCCGAAACCGGGCATTTGTGCGTCTGTACCCTGCACGCCAATAACGCCAACCAGGCCTTAGACCGCATT
CTGCATTTTTTCCCGGAAGAAATGCACAGCCAGCTGTTCATGGATTTGTCTTTGAACTTGCGCGGTATCGTCGCCCAACA
ATTGATTCAGCGCGCCGACGGCAAGGGCCGCTACCCGGCTATTGAGATTTTGCTGAATACCCCGCTGGCATCAGACATGA
TCCGCAAGGGCGAAGTACACAAATTAAAAGAACTGATGAAAAGCTCCCGCGAGCATGGCATGCAGACTTTCGACCAAGCG
CTTTACGATCTGTATACGGCGGGTAAAATTGGTTACGATGACGCCTTGCACGCTGCCGACTCCCGCAACGAGGTGCGCCT
GATGATTAAACTGGGGGCCGAGAACGTCAACTTCGAAACCGCCGGCATGACCCTGGCCGAAAACGACGACGAGGGAGGCA
GTCTTTTTAAATAG
ATGGACTTTAAAGCCCTATTGGCCCTGATGGTGGAAAAGAAAGCGTCCGACTTGTTCATCACCGCCGGCCGGCCGCCGTC
GATGAAAGTCAACGGCAAAGTCGTCGAAGTGTCCAAATCCGTTTTAACTAGCGAACAGACCATGATGCTGGTTCTCAGTA
TCATGTCGCAGCGCCAACGCGACGAGTTTGAAAACACTCACGAATGCCAGTTTGCCTTGAGTGCCCACAGTCTTGGCCGG
TTCCGGGTCAGTGCGTTTACCCAACGCGACTCGGCCGGCATGGTGTTGCGCCGCATCGAAACCACCATCCCCAGCGCAGA
GGAATTGCACCTGCCGCCGGTGTTGAAAGAACTGATCATGTACAAGCGCGGTCTGGTGATGTTTGTCGGTGCCACCGGTA
CCGGTAAATCAACCTCGCTGGCGGCCTTGATTCGGCACCGCAACGAAAACAGCAGCGGCCATATCATTTCCATTGAAGAC
CCTATCGAGTTTATCCATCCGCACAAGGGCTGCATCATCACCCAGCGCGAAGTGGGCCTGGATACCGAATCGTTTGAAGT
GGCGTTAAAAAACACCCTGCGCCAAGCGCCGGACGTAATCCTGATTGGCGAGGTCAGAAGCCGGGACACCATGCAACATG
CGATCACCTTCGCCGAAACCGGGCATTTGTGCGTCTGTACCCTGCACGCCAATAACGCCAACCAGGCCTTAGACCGCATT
CTGCATTTTTTCCCGGAAGAAATGCACAGCCAGCTGTTCATGGATTTGTCTTTGAACTTGCGCGGTATCGTCGCCCAACA
ATTGATTCAGCGCGCCGACGGCAAGGGCCGCTACCCGGCTATTGAGATTTTGCTGAATACCCCGCTGGCATCAGACATGA
TCCGCAAGGGCGAAGTACACAAATTAAAAGAACTGATGAAAAGCTCCCGCGAGCATGGCATGCAGACTTTCGACCAAGCG
CTTTACGATCTGTATACGGCGGGTAAAATTGGTTACGATGACGCCTTGCACGCTGCCGACTCCCGCAACGAGGTGCGCCT
GATGATTAAACTGGGGGCCGAGAACGTCAACTTCGAAACCGCCGGCATGACCCTGGCCGAAAACGACGACGAGGGAGGCA
GTCTTTTTAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
66.929 |
100 |
0.676 |
| pilU | Acinetobacter baylyi ADP1 |
64.789 |
94.164 |
0.61 |
| pilU | Vibrio cholerae strain A1552 |
57.143 |
92.838 |
0.531 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
43.678 |
92.308 |
0.403 |
| pilT | Legionella pneumophila strain Lp02 |
41.888 |
89.92 |
0.377 |
| pilT | Legionella pneumophila strain ERS1305867 |
41.888 |
89.92 |
0.377 |
| pilT | Acinetobacter nosocomialis M2 |
40.118 |
89.92 |
0.361 |
| pilT | Acinetobacter baumannii D1279779 |
40.118 |
89.92 |
0.361 |
| pilT | Acinetobacter baumannii strain A118 |
40.118 |
89.92 |
0.361 |