Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ACAM23_RS09295 | Genome accession | NZ_AP031394 |
| Coordinates | 1785731..1786126 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain 16P28 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1780731..1791126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACAM23_RS09270 (SPNE16P28_18130) | - | 1780954..1781487 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| ACAM23_RS09275 | - | 1781845..1782168 (-) | 324 | WP_073177330.1 | hypothetical protein | - |
| ACAM23_RS09280 (SPNE16P28_18150) | - | 1782211..1783440 (+) | 1230 | WP_000436324.1 | ISL3 family transposase | - |
| ACAM23_RS09285 (SPNE16P28_18160) | groL | 1783539..1785161 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| ACAM23_RS09290 (SPNE16P28_18170) | groES | 1785177..1785461 (-) | 285 | WP_000917330.1 | co-chaperone GroES | - |
| ACAM23_RS09295 (SPNE16P28_18180) | ssbB/cilA | 1785731..1786126 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| ACAM23_RS09300 (SPNE16P28_18190) | - | 1786204..1786965 (-) | 762 | WP_001107757.1 | SDR family oxidoreductase | - |
| ACAM23_RS09305 (SPNE16P28_18200) | ytpR | 1786998..1787624 (-) | 627 | WP_000578302.1 | YtpR family tRNA-binding protein | - |
| ACAM23_RS09310 (SPNE16P28_18210) | - | 1787640..1787957 (-) | 318 | WP_000615774.1 | thioredoxin family protein | - |
| ACAM23_RS09315 (SPNE16P28_18220) | - | 1787954..1788253 (-) | 300 | WP_001818001.1 | DUF4651 domain-containing protein | - |
| ACAM23_RS09320 | - | 1788347..1788478 (+) | 132 | WP_001811306.1 | hypothetical protein | - |
| ACAM23_RS09325 | - | 1788590..1788735 (-) | 146 | Protein_1825 | cell wall-binding protein | - |
| ACAM23_RS09330 (SPNE16P28_18230) | - | 1788947..1789621 (-) | 675 | WP_000725722.1 | membrane protein | - |
| ACAM23_RS09335 (SPNE16P28_18240) | - | 1789627..1790073 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ACAM23_RS09340 | - | 1790187..1790690 (-) | 504 | WP_000800939.1 | phosphatase PAP2 family protein | - |
| ACAM23_RS09345 (SPNE16P28_18250) | - | 1790687..1791049 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=108984 ACAM23_RS09295 WP_000282467.1 1785731..1786126(-) (ssbB/cilA) [Streptococcus pneumoniae strain 16P28]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=108984 ACAM23_RS09295 WP_000282467.1 1785731..1786126(-) (ssbB/cilA) [Streptococcus pneumoniae strain 16P28]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGACTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGCCAAATGAACTACGTGACCGAAGTACTTGTCACAGGATTCCAACTCTTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |