Detailed information NTG1086034

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACJWMD_RS09485
• Genome accession: NZ_CP177182
• Coordinates: 1995872..1996264 (-)
• Length: 130 a.a.
• NCBI ID: WP_002885697.1
• Uniprot ID: A0AB33ZFB8
• Organism: Streptococcus salivarius strain MRD6060
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 1990872..2001264

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJWMD_RS09445	dapD	1990942..1991640 (-)	699	WP_002886999.1	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	-
ACJWMD_RS09450	-	1991726..1992478 (-)	753	WP_002887000.1	HAD family hydrolase	-
ACJWMD_RS09455	-	1992592..1993431 (-)	840	WP_002887001.1	methyltransferase domain-containing protein	-
ACJWMD_RS09465	-	1993852..1994010 (+)	159	WP_002885650.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ACJWMD_RS09470	-	1994030..1994197 (+)	168	WP_002887002.1	class IIb bacteriocin, lactobin A/cerein 7B family	-
ACJWMD_RS09475	-	1994245..1994496 (+)	252	WP_002887003.1	hypothetical protein	-
ACJWMD_RS09480	tadA	1994583..1995101 (-)	519	WP_002887004.1	tRNA adenosine(34) deaminase TadA	-
ACJWMD_RS09485	ssbA	1995872..1996264 (-)	393	WP_002885697.1	single-stranded DNA-binding protein	Machinery gene
ACJWMD_RS09490	-	1996693..1997370 (-)	678	WP_002887005.1	CPBP family intramembrane glutamic endopeptidase	-
ACJWMD_RS09495	ytpR	1997637..1998260 (-)	624	WP_002885779.1	YtpR family tRNA-binding protein	-
ACJWMD_RS09500	-	1998292..1998816 (-)	525	WP_002885713.1	hypothetical protein	-
ACJWMD_RS09505	-	1998820..1999134 (-)	315	WP_002887006.1	thioredoxin family protein	-
ACJWMD_RS09510	-	1999131..1999415 (-)	285	WP_002885838.1	DUF4651 domain-containing protein	-
ACJWMD_RS09515	pepA	1999515..2000582 (+)	1068	WP_002887007.1	glutamyl aminopeptidase	-

Sequence

Protein

• Length: 130 a.a.
• Molecular weight: 14759.67 Da
• Isoelectric Point: 5.9275

>NTDB_id=1086034 ACJWMD_RS09485 WP_002885697.1 1995872..1996264(-) (ssbA) [Streptococcus salivarius strain MRD6060]
MYNKVILIGRLTATPEMVKTASDRSFTRVTVAVNRRYKTQNGEREADFITVVVWGRLAETLASYASKGSLISLDGELRTR
KYDKDGQTHYVTEVLCSSFQLLESRAQRAVRENNPDNDLADLVLEEELPF

Nucleotide

• Length: 393 bp

>NTDB_id=1086034 ACJWMD_RS09485 WP_002885697.1 1995872..1996264(-) (ssbA) [Streptococcus salivarius strain MRD6060]
ATGTATAACAAAGTTATTTTAATTGGACGTTTGACGGCGACTCCTGAAATGGTAAAAACTGCTAGCGATAGGTCTTTTAC
ACGTGTTACAGTTGCGGTTAATCGTCGCTATAAGACGCAAAATGGTGAGCGTGAGGCTGACTTTATTACAGTGGTTGTCT
GGGGGCGTTTGGCTGAGACCTTAGCATCTTATGCTAGCAAGGGGAGTTTAATTTCTCTTGATGGTGAGCTTCGTACTCGT
AAGTACGATAAGGATGGTCAAACTCATTACGTTACTGAAGTGCTTTGTTCCTCTTTCCAACTTCTGGAGAGTCGTGCTCA
GCGTGCTGTTAGGGAAAATAATCCTGATAATGACTTGGCTGACCTCGTCTTGGAAGAAGAACTTCCCTTCTAG

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	80.916	100	0.815
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.769
ssbB	Streptococcus sobrinus strain NIDR 6715-7	76.336	100	0.769
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.762
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.762
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.746
ssbB	Lactococcus lactis subsp. cremoris KW2	61.607	86.154	0.531
ssbA	Bacillus subtilis subsp. subtilis str. 168	48.113	81.538	0.392
ssb	Latilactobacillus sakei subsp. sakei 23K	47.17	81.538	0.385