Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACKZ7V_RS07455 | Genome accession | NZ_CP176566 |
| Coordinates | 1496851..1497279 (+) | Length | 142 a.a. |
| NCBI ID | WP_031867650.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain IMT37083 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1488321..1536569 | 1496851..1497279 | within | 0 |
Gene organization within MGE regions
Location: 1488321..1536569
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKZ7V_RS07385 (ACKZ7V_07385) | sufB | 1488321..1489718 (+) | 1398 | WP_001074405.1 | Fe-S cluster assembly protein SufB | - |
| ACKZ7V_RS07390 (ACKZ7V_07390) | - | 1489786..1490835 (-) | 1050 | WP_148843730.1 | tyrosine-type recombinase/integrase | - |
| ACKZ7V_RS07395 (ACKZ7V_07395) | - | 1491126..1492007 (-) | 882 | WP_148843731.1 | hypothetical protein | - |
| ACKZ7V_RS07400 (ACKZ7V_07400) | - | 1492106..1492651 (-) | 546 | WP_061735314.1 | Ltp family lipoprotein | - |
| ACKZ7V_RS07405 (ACKZ7V_07405) | - | 1492702..1493334 (-) | 633 | WP_148843732.1 | LexA family protein | - |
| ACKZ7V_RS07410 (ACKZ7V_07410) | - | 1493488..1493715 (+) | 228 | WP_148843733.1 | helix-turn-helix transcriptional regulator | - |
| ACKZ7V_RS07415 (ACKZ7V_07415) | - | 1493738..1494490 (+) | 753 | WP_101433205.1 | phage antirepressor KilAC domain-containing protein | - |
| ACKZ7V_RS07420 (ACKZ7V_07420) | - | 1494506..1494709 (+) | 204 | Protein_1456 | hypothetical protein | - |
| ACKZ7V_RS07425 (ACKZ7V_07425) | - | 1494677..1494922 (-) | 246 | WP_000122246.1 | hypothetical protein | - |
| ACKZ7V_RS07430 (ACKZ7V_07430) | - | 1494993..1495214 (+) | 222 | WP_000594790.1 | hypothetical protein | - |
| ACKZ7V_RS07435 (ACKZ7V_07435) | - | 1495207..1495368 (+) | 162 | WP_031872343.1 | DUF1270 family protein | - |
| ACKZ7V_RS07440 (ACKZ7V_07440) | - | 1495459..1495719 (+) | 261 | WP_031867649.1 | DUF1108 family protein | - |
| ACKZ7V_RS07445 (ACKZ7V_07445) | - | 1495734..1496213 (+) | 480 | WP_000002517.1 | siphovirus Gp157 family protein | - |
| ACKZ7V_RS07450 (ACKZ7V_07450) | - | 1496213..1496851 (+) | 639 | WP_001043063.1 | ERF family protein | - |
| ACKZ7V_RS07455 (ACKZ7V_07455) | ssbA | 1496851..1497279 (+) | 429 | WP_031867650.1 | single-stranded DNA-binding protein | Machinery gene |
| ACKZ7V_RS07460 (ACKZ7V_07460) | - | 1497293..1497961 (+) | 669 | WP_148843734.1 | putative HNHc nuclease | - |
| ACKZ7V_RS07465 (ACKZ7V_07465) | - | 1497961..1498722 (+) | 762 | WP_115056537.1 | AP2 domain-containing protein | - |
| ACKZ7V_RS07470 (ACKZ7V_07470) | - | 1498715..1499476 (+) | 762 | WP_148843735.1 | conserved phage C-terminal domain-containing protein | - |
| ACKZ7V_RS07475 (ACKZ7V_07475) | - | 1499489..1500274 (+) | 786 | WP_148843736.1 | ATP-binding protein | - |
| ACKZ7V_RS07480 (ACKZ7V_07480) | - | 1500271..1500429 (+) | 159 | WP_148843737.1 | hypothetical protein | - |
| ACKZ7V_RS07485 (ACKZ7V_07485) | - | 1500442..1500663 (+) | 222 | WP_001123688.1 | DUF3269 family protein | - |
| ACKZ7V_RS07490 (ACKZ7V_07490) | - | 1500673..1501080 (+) | 408 | WP_148843738.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACKZ7V_RS07495 (ACKZ7V_07495) | - | 1501080..1501265 (+) | 186 | WP_001187254.1 | DUF3113 family protein | - |
| ACKZ7V_RS07500 (ACKZ7V_07500) | - | 1501266..1501883 (+) | 618 | WP_148843739.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACKZ7V_RS07505 (ACKZ7V_07505) | - | 1501884..1502132 (+) | 249 | WP_126509067.1 | phi PVL orf 51-like protein | - |
| ACKZ7V_RS07510 (ACKZ7V_07510) | - | 1502146..1502556 (+) | 411 | WP_000695750.1 | hypothetical protein | - |
| ACKZ7V_RS07515 (ACKZ7V_07515) | - | 1502556..1502831 (+) | 276 | WP_000399884.1 | hypothetical protein | - |
| ACKZ7V_RS07520 (ACKZ7V_07520) | - | 1502824..1503072 (+) | 249 | WP_148843740.1 | DUF1024 family protein | - |
| ACKZ7V_RS07525 (ACKZ7V_07525) | - | 1503065..1503601 (+) | 537 | WP_000185699.1 | dUTPase | - |
| ACKZ7V_RS07530 (ACKZ7V_07530) | - | 1503638..1503883 (+) | 246 | WP_148843741.1 | hypothetical protein | - |
| ACKZ7V_RS07535 (ACKZ7V_07535) | - | 1503880..1504086 (+) | 207 | WP_031793844.1 | DUF1381 domain-containing protein | - |
| ACKZ7V_RS07540 (ACKZ7V_07540) | - | 1504083..1504277 (+) | 195 | WP_000141185.1 | hypothetical protein | - |
| ACKZ7V_RS07545 (ACKZ7V_07545) | - | 1504274..1504477 (+) | 204 | WP_106095086.1 | hypothetical protein | - |
| ACKZ7V_RS07550 (ACKZ7V_07550) | - | 1504470..1504706 (+) | 237 | WP_063125008.1 | hypothetical protein | - |
| ACKZ7V_RS07555 (ACKZ7V_07555) | rinB | 1504699..1504872 (+) | 174 | WP_148843742.1 | transcriptional activator RinB | - |
| ACKZ7V_RS07560 (ACKZ7V_07560) | - | 1504873..1505274 (+) | 402 | WP_103151607.1 | hypothetical protein | - |
| ACKZ7V_RS07565 (ACKZ7V_07565) | - | 1505629..1506123 (+) | 495 | WP_000594091.1 | terminase small subunit | - |
| ACKZ7V_RS07570 (ACKZ7V_07570) | - | 1506116..1507339 (+) | 1224 | WP_001037577.1 | PBSX family phage terminase large subunit | - |
| ACKZ7V_RS07575 (ACKZ7V_07575) | - | 1507336..1508760 (+) | 1425 | WP_148843744.1 | phage portal protein | - |
| ACKZ7V_RS07580 (ACKZ7V_07580) | - | 1508729..1509679 (+) | 951 | WP_148843745.1 | phage head morphogenesis protein | - |
| ACKZ7V_RS07585 (ACKZ7V_07585) | - | 1509775..1510359 (+) | 585 | WP_148843746.1 | DUF4355 domain-containing protein | - |
| ACKZ7V_RS07590 (ACKZ7V_07590) | - | 1510376..1511290 (+) | 915 | WP_148843747.1 | phage major capsid protein | - |
| ACKZ7V_RS07595 (ACKZ7V_07595) | - | 1511302..1511445 (+) | 144 | WP_000002930.1 | hypothetical protein | - |
| ACKZ7V_RS07600 (ACKZ7V_07600) | - | 1511451..1511801 (+) | 351 | WP_016187275.1 | hypothetical protein | - |
| ACKZ7V_RS07605 (ACKZ7V_07605) | - | 1511813..1512148 (+) | 336 | WP_021285837.1 | phage head closure protein | - |
| ACKZ7V_RS07610 (ACKZ7V_07610) | - | 1512135..1512542 (+) | 408 | WP_148843748.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| ACKZ7V_RS07615 (ACKZ7V_07615) | - | 1512555..1512980 (+) | 426 | WP_031912142.1 | DUF3168 domain-containing protein | - |
| ACKZ7V_RS07620 (ACKZ7V_07620) | - | 1512981..1513538 (+) | 558 | WP_000057582.1 | tail protein | - |
| ACKZ7V_RS07625 (ACKZ7V_07625) | - | 1513605..1514111 (+) | 507 | WP_000134337.1 | tail assembly chaperone | - |
| ACKZ7V_RS07630 (ACKZ7V_07630) | - | 1514156..1514440 (+) | 285 | WP_000880587.1 | hypothetical protein | - |
| ACKZ7V_RS07635 (ACKZ7V_07635) | - | 1514444..1517329 (+) | 2886 | WP_148843749.1 | terminase | - |
| ACKZ7V_RS07640 (ACKZ7V_07640) | - | 1517344..1518285 (+) | 942 | WP_148843750.1 | phage tail domain-containing protein | - |
| ACKZ7V_RS07645 (ACKZ7V_07645) | - | 1518296..1520182 (+) | 1887 | WP_148843751.1 | SGNH/GDSL hydrolase family protein | - |
| ACKZ7V_RS07650 (ACKZ7V_07650) | - | 1520195..1522093 (+) | 1899 | WP_148843752.1 | hypothetical protein | - |
| ACKZ7V_RS07655 (ACKZ7V_07655) | - | 1522093..1523916 (+) | 1824 | WP_148843753.1 | phage baseplate upper protein | - |
| ACKZ7V_RS07660 (ACKZ7V_07660) | - | 1523916..1524296 (+) | 381 | WP_031887595.1 | DUF2977 domain-containing protein | - |
| ACKZ7V_RS07665 (ACKZ7V_07665) | - | 1524289..1524465 (+) | 177 | WP_031887596.1 | XkdX family protein | - |
| ACKZ7V_RS07670 (ACKZ7V_07670) | - | 1524506..1524805 (+) | 300 | WP_031887597.1 | DUF2951 family protein | - |
| ACKZ7V_RS07675 (ACKZ7V_07675) | - | 1524942..1526816 (+) | 1875 | WP_148843754.1 | glucosaminidase domain-containing protein | - |
| ACKZ7V_RS07680 (ACKZ7V_07680) | - | 1526829..1527056 (+) | 228 | Protein_1508 | BppU family phage baseplate upper protein | - |
| ACKZ7V_RS07685 (ACKZ7V_07685) | - | 1527299..1527553 (+) | 255 | WP_045178738.1 | phage holin | - |
| ACKZ7V_RS07690 (ACKZ7V_07690) | - | 1527565..1528320 (+) | 756 | WP_162660215.1 | CHAP domain-containing protein | - |
| ACKZ7V_RS07695 (ACKZ7V_07695) | - | 1528508..1529602 (+) | 1095 | WP_111762097.1 | hypothetical protein | - |
| ACKZ7V_RS07700 (ACKZ7V_07700) | - | 1530324..1530851 (+) | 528 | WP_000455172.1 | Panacea domain-containing protein | - |
| ACKZ7V_RS07705 (ACKZ7V_07705) | - | 1530841..1531239 (+) | 399 | WP_000557464.1 | hypothetical protein | - |
| ACKZ7V_RS07710 (ACKZ7V_07710) | - | 1531684..1531823 (+) | 140 | Protein_1514 | hypothetical protein | - |
| ACKZ7V_RS07715 (ACKZ7V_07715) | - | 1531829..1532143 (-) | 315 | WP_111762098.1 | hypothetical protein | - |
| ACKZ7V_RS07720 (ACKZ7V_07720) | - | 1532508..1533548 (+) | 1041 | WP_111762099.1 | hemolysin family protein | - |
| ACKZ7V_RS07725 (ACKZ7V_07725) | - | 1533562..1534629 (+) | 1068 | WP_111762100.1 | NAD(P)H-dependent flavin oxidoreductase | - |
| ACKZ7V_RS07730 (ACKZ7V_07730) | - | 1534881..1535729 (+) | 849 | WP_111762101.1 | DUF72 domain-containing protein | - |
| ACKZ7V_RS07735 (ACKZ7V_07735) | - | 1535742..1536569 (+) | 828 | WP_000927625.1 | sulfite exporter TauE/SafE family protein | - |
Sequence
Protein
Download Length: 142 a.a. Molecular weight: 16065.58 Da Isoelectric Point: 5.8724
>NTDB_id=1080933 ACKZ7V_RS07455 WP_031867650.1 1496851..1497279(+) (ssbA) [Staphylococcus aureus strain IMT37083]
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTTITDDDLPF
MLNRTVLVGRLTKDPEYRTTPNGVSVTTFTIAVNRTFTNAQGEREADFINCVTFRKQAENVNNYLSKGSLAGVDGRLQSR
SYENKDGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTTITDDDLPF
Nucleotide
Download Length: 429 bp
>NTDB_id=1080933 ACKZ7V_RS07455 WP_031867650.1 1496851..1497279(+) (ssbA) [Staphylococcus aureus strain IMT37083]
ATGCTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCGAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTA
CGATTACTGATGATGACTTACCGTTCTGA
ATGCTAAACAGAACAGTATTAGTAGGACGCTTAACAAAAGATCCAGAATATAGAACAACGCCGAATGGTGTGAGTGTTAC
CACTTTCACTATCGCAGTTAACAGAACATTTACTAACGCTCAAGGAGAACGTGAGGCAGACTTTATTAACTGTGTAACTT
TTAGAAAACAAGCAGAAAATGTAAATAATTATTTATCCAAAGGGTCATTGGCTGGCGTTGATGGACGTTTACAATCACGC
AGTTATGAAAACAAAGACGGGCAACGTGTATTTGTCACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTA
CGATTACTGATGATGACTTACCGTTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.721 |
100 |
0.711 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.613 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
74.648 |
0.437 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
42.657 |
100 |
0.43 |
| ssbA | Streptococcus mutans UA159 |
41.549 |
100 |
0.415 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
40.845 |
100 |
0.408 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae D39 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
40.141 |
100 |
0.401 |
| ssbB/cilA | Streptococcus mitis SK321 |
40.141 |
100 |
0.401 |