Detailed information NTG1069072

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACF1RT_RS01640
• Genome accession: NZ_CP172847
• Coordinates: 325942..326436 (+)
• Length: 164 a.a.
• NCBI ID: WP_002261867.1
• Uniprot ID: A0AAX1K2T1
• Organism: Streptococcus mutans strain DPC6143
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 320942..331436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF1RT_RS01615 (ACF1RT_01615)	-	321301..322350 (+)	1050	WP_002264190.1	zinc-dependent alcohol dehydrogenase family protein	-
ACF1RT_RS01620 (ACF1RT_01620)	mutY	322542..323687 (-)	1146	WP_002264191.1	A/G-specific adenine glycosylase	-
ACF1RT_RS01625 (ACF1RT_01625)	-	324725..324928 (-)	204	WP_315685160.1	hypothetical protein	-
ACF1RT_RS01630 (ACF1RT_01630)	-	325233..325478 (+)	246	WP_002263367.1	hypothetical protein	-
ACF1RT_RS01635 (ACF1RT_01635)	rpsF	325634..325924 (+)	291	WP_002261866.1	30S ribosomal protein S6	-
ACF1RT_RS01640 (ACF1RT_01640)	ssbA	325942..326436 (+)	495	WP_002261867.1	single-stranded DNA-binding protein	Machinery gene
ACF1RT_RS01645 (ACF1RT_01645)	rpsR	326465..326704 (+)	240	WP_000068664.1	30S ribosomal protein S18	-
ACF1RT_RS01650 (ACF1RT_01650)	-	327023..327742 (+)	720	WP_002262671.1	TraX family protein	-
ACF1RT_RS01655 (ACF1RT_01655)	hdrM	327750..328436 (-)	687	WP_002262670.1	hdrR negative regulator HdrM	Regulator
ACF1RT_RS01660 (ACF1RT_01660)	hdrR	328433..328789 (-)	357	WP_002262669.1	LytTR family transcriptional regulator HdrR	Regulator
ACF1RT_RS01665 (ACF1RT_01665)	-	328928..329590 (-)	663	WP_002262668.1	DUF1129 domain-containing protein	-
ACF1RT_RS01670 (ACF1RT_01670)	-	329873..330817 (-)	945	WP_002262667.1	magnesium transporter CorA family protein	-

Sequence

Protein

• Length: 164 a.a.
• Molecular weight: 18331.97 Da
• Isoelectric Point: 4.7187

>NTDB_id=1069072 ACF1RT_RS01640 WP_002261867.1 325942..326436(+) (ssbA) [Streptococcus mutans strain DPC6143]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINIVIWRQQAENLANWAKKGTLLGITGRIQTR
NYENQQGQRVYVTEVVADNFQILESRATREGQSNSYNAGGNNNFGGNNFSSQGSSQSQTPNFARDESPFGDSNPMDISDD
DLPF

Nucleotide

• Length: 495 bp

>NTDB_id=1069072 ACF1RT_RS01640 WP_002261867.1 325942..326436(+) (ssbA) [Streptococcus mutans strain DPC6143]
ATGATTAATAATGTAGTACTGGTTGGTCGCATGACTCGTGATGCTGAGCTCCGTTACACCCCAAGTAATCAAGCTGTGGC
AACTTTTACCCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAGCGTGAAGCTGATTTCATTAACATCGTGATTT
GGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGGACTCTTTTAGGCATTACTGGTCGAATCCAGACCCGC
AATTATGAAAACCAACAAGGTCAGCGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAATTTTGGAAAGTCGTGC
TACACGTGAAGGTCAATCAAACAGTTATAATGCTGGTGGTAACAATAACTTTGGCGGAAATAATTTTTCTTCCCAAGGTT
CTTCACAATCTCAAACGCCAAACTTTGCTAGAGATGAAAGTCCATTTGGTGATTCAAATCCTATGGATATTTCAGACGAT
GATCTTCCGTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	57.062	100	0.616
ssb	Latilactobacillus sakei subsp. sakei 23K	57.059	100	0.591
ssbB/cilA	Streptococcus pneumoniae TIGR4	51.261	72.561	0.372
ssb	Glaesserella parasuis strain SC1401	32.62	100	0.372
ssbB	Streptococcus sobrinus strain NIDR 6715-7	52.632	69.512	0.366
ssbB/cilA	Streptococcus mitis NCTC 12261	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae Rx1	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae D39	50.42	72.561	0.366
ssbB/cilA	Streptococcus pneumoniae R6	50.42	72.561	0.366
ssbB/cilA	Streptococcus mitis SK321	50.42	72.561	0.366