Detailed information NTG1069065

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACF1RT_RS01215
• Genome accession: NZ_CP172847
• Coordinates: 241918..242313 (+)
• Length: 131 a.a.
• NCBI ID: WP_002263999.1
• Uniprot ID: A0AAX1K1Y7
• Organism: Streptococcus mutans strain DPC6143
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 236918..247313

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACF1RT_RS01175 (ACF1RT_01175)	-	237017..237679 (+)	663	WP_002263446.1	type II CAAX endopeptidase family protein	-
ACF1RT_RS01180 (ACF1RT_01180)	proC	237764..238534 (-)	771	WP_002263447.1	pyrroline-5-carboxylate reductase	-
ACF1RT_RS01185 (ACF1RT_01185)	pepA	238590..239657 (-)	1068	WP_002269467.1	glutamyl aminopeptidase	-
ACF1RT_RS01190 (ACF1RT_01190)	-	239717..240025 (+)	309	WP_002264004.1	DUF4651 domain-containing protein	-
ACF1RT_RS01195 (ACF1RT_01195)	-	240003..240332 (+)	330	WP_002264003.1	thioredoxin family protein	-
ACF1RT_RS01200 (ACF1RT_01200)	ytpR	240329..240955 (+)	627	WP_002269469.1	YtpR family tRNA-binding protein	-
ACF1RT_RS01205 (ACF1RT_01205)	-	241044..241475 (+)	432	WP_019805786.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACF1RT_RS01210 (ACF1RT_01210)	-	241475..241831 (+)	357	WP_002293284.1	rhodanese-like domain-containing protein	-
ACF1RT_RS01215 (ACF1RT_01215)	ssbA	241918..242313 (+)	396	WP_002263999.1	single-stranded DNA-binding protein	Machinery gene
ACF1RT_RS01220 (ACF1RT_01220)	-	242729..243691 (+)	963	WP_002263455.1	sugar ABC transporter substrate-binding protein	-
ACF1RT_RS01225 (ACF1RT_01225)	-	243691..245013 (+)	1323	WP_400260323.1	sensor histidine kinase	-
ACF1RT_RS01230 (ACF1RT_01230)	-	245013..245693 (+)	681	WP_002263457.1	response regulator transcription factor	-
ACF1RT_RS01235 (ACF1RT_01235)	-	245686..246993 (+)	1308	WP_002274168.1	extracellular solute-binding protein	-
ACF1RT_RS01240 (ACF1RT_01240)	-	247059..247262 (+)	204	Protein_219	hypothetical protein	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14869.91 Da
• Isoelectric Point: 6.4856

>NTDB_id=1069065 ACF1RT_RS01215 WP_002263999.1 241918..242313(+) (ssbA) [Streptococcus mutans strain DPC6143]
MYNKVILIGRLVATPEMVKTPKDKSVTRVTLAVNRRFKSQDGERQADFVNVVLWGRLAETIASYGSKGSLISLDGELRTR
KYEKDGVTHFVTEVLGHSFQLLESRAQRAMRENNSENDLADLVLEEEELPF

Nucleotide

• Length: 396 bp

>NTDB_id=1069065 ACF1RT_RS01215 WP_002263999.1 241918..242313(+) (ssbA) [Streptococcus mutans strain DPC6143]
ATGTATAATAAAGTTATTTTGATTGGTCGTTTAGTTGCGACACCTGAAATGGTAAAAACACCAAAGGATAAGTCTGTTAC
GCGCGTGACACTGGCTGTCAATCGGCGATTTAAAAGTCAAGATGGGGAAAGGCAGGCTGATTTTGTCAATGTTGTTCTTT
GGGGCAGATTGGCAGAAACAATAGCTTCCTATGGTAGCAAGGGAAGTCTCATCTCTCTTGATGGAGAATTGCGTACCCGT
AAATATGAAAAAGATGGCGTCACTCATTTTGTGACTGAAGTTTTGGGACACTCCTTTCAATTACTGGAAAGTCGTGCTCA
ACGTGCTATGCGTGAAAATAATTCTGAAAATGATTTGGCCGATTTGGTTCTGGAAGAGGAGGAACTCCCTTTTTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	99.237	100	0.992
ssbB	Streptococcus sobrinus strain NIDR 6715-7	79.389	100	0.794
ssbB/cilA	Streptococcus pneumoniae TIGR4	76.336	100	0.763
ssbB/cilA	Streptococcus pneumoniae Rx1	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae D39	75.573	100	0.756
ssbB/cilA	Streptococcus pneumoniae R6	75.573	100	0.756
ssbB/cilA	Streptococcus mitis SK321	75.573	100	0.756
ssbB/cilA	Streptococcus mitis NCTC 12261	74.046	100	0.74
ssbB	Lactococcus lactis subsp. cremoris KW2	58.929	85.496	0.504
ssbA	Bacillus subtilis subsp. subtilis str. 168	50.943	80.916	0.412
ssb	Latilactobacillus sakei subsp. sakei 23K	42.478	86.26	0.366