Detailed information NTG1064746

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACHMXC_RS00825
• Genome accession: NZ_CP171997
• Coordinates: 188175..189308 (+)
• Length: 377 a.a.
• NCBI ID: WP_056062158.1
• Uniprot ID: -
• Organism: Acidovorax delafieldii strain UC81_30
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 183175..194308

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACHMXC_RS00810 (ACHMXC_00810)	-	184465..185151 (+)	687	WP_395455583.1	hypothetical protein	-
ACHMXC_RS00815 (ACHMXC_00815)	-	185239..186402 (-)	1164	WP_395455585.1	glycerophosphodiester phosphodiesterase	-
ACHMXC_RS00820 (ACHMXC_00820)	gdhA	186679..188022 (+)	1344	WP_395455587.1	NADP-specific glutamate dehydrogenase	-
ACHMXC_RS00825 (ACHMXC_00825)	pilU	188175..189308 (+)	1134	WP_056062158.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACHMXC_RS00830 (ACHMXC_00830)	-	189433..190266 (+)	834	WP_056743467.1	alpha/beta hydrolase	-
ACHMXC_RS00835 (ACHMXC_00835)	-	190290..191672 (-)	1383	WP_395455589.1	serine hydrolase domain-containing protein	-
ACHMXC_RS00840 (ACHMXC_00840)	-	191912..193153 (+)	1242	WP_395455591.1	multidrug effflux MFS transporter	-
ACHMXC_RS00845 (ACHMXC_00845)	miaA	193140..194141 (+)	1002	WP_260666833.1	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41360.62 Da
• Isoelectric Point: 6.1325

>NTDB_id=1064746 ACHMXC_RS00825 WP_056062158.1 188175..189308(+) (pilU) [Acidovorax delafieldii strain UC81_30]
MEIFSFLNVMVEKGGSDLFFSVGAPVNLKIEGVTHPLKMPALLPGQVKQLAYAVMNEKQIGEFEAKQEMNLSISAENLGR
FRVNVFVQRGETGMVVRYIKNKIPPLAALGLPPVLEKLVLRKRGLVLVTGATGSGKSTTLASMINYRNENVTGHILTIED
PLEFLHAHKRSVVDQREVGIDTQSYEEALKNALREAPDVIMIGEIRDRNTMKQAIAYAETGHLCLSTLHANNANQAMERV
INFFPEDAHHQLLMDLSLNLAGVISQRLIPGLHEKLVPAVEVMLNSPYIADLIAKGEFSGIKEAMGHSTEIGMCTFDQAL
YQLYTDGRISLDEALHNADSRTDLALRVRLAAGVTTQDAGELSIDTSSPMQSASRLS

Nucleotide

• Length: 1134 bp

>NTDB_id=1064746 ACHMXC_RS00825 WP_056062158.1 188175..189308(+) (pilU) [Acidovorax delafieldii strain UC81_30]
GTGGAAATCTTCAGCTTCTTGAACGTCATGGTCGAAAAGGGAGGCTCGGACCTCTTTTTCAGTGTCGGTGCGCCGGTCAA
TCTCAAGATCGAAGGGGTCACACACCCGTTGAAGATGCCCGCCTTGTTGCCCGGTCAGGTCAAGCAGCTGGCCTACGCGG
TGATGAACGAAAAGCAGATCGGCGAGTTCGAGGCCAAGCAGGAGATGAACCTGTCGATCTCGGCGGAGAACCTGGGGCGC
TTTCGGGTCAATGTATTCGTGCAGCGCGGCGAAACCGGCATGGTGGTGCGCTACATCAAGAACAAGATCCCGCCGCTGGC
CGCGCTGGGCCTGCCCCCGGTGCTGGAAAAGCTGGTGCTGCGCAAGCGCGGCCTGGTGCTGGTGACCGGAGCCACGGGCT
CGGGCAAATCGACCACGCTGGCGTCGATGATCAACTACCGCAACGAGAACGTCACGGGCCACATCCTCACCATCGAAGAC
CCGCTGGAGTTTTTGCACGCGCACAAGCGCTCGGTGGTGGACCAGCGCGAGGTGGGCATCGACACGCAGTCGTACGAAGA
AGCCCTGAAGAACGCGCTGCGCGAGGCGCCGGACGTGATCATGATCGGCGAGATCCGCGACCGCAACACCATGAAGCAGG
CCATTGCCTATGCCGAGACCGGCCACCTGTGCCTGTCCACCCTGCACGCCAACAACGCCAACCAGGCCATGGAGCGGGTC
ATCAATTTCTTCCCCGAAGACGCCCACCACCAGCTGCTGATGGACCTGAGCCTGAACCTGGCCGGCGTGATCTCTCAGCG
CCTGATCCCCGGCCTGCACGAAAAGCTGGTGCCTGCGGTGGAGGTCATGCTCAACTCGCCCTACATCGCCGACCTGATCG
CCAAGGGCGAGTTTTCGGGCATCAAGGAGGCCATGGGCCACAGCACCGAGATCGGCATGTGCACCTTTGACCAGGCGCTG
TACCAGCTCTACACCGACGGCCGTATCTCGTTGGACGAGGCCCTGCACAACGCGGACTCGCGCACCGACCTGGCGCTGCG
CGTGCGCCTGGCGGCCGGCGTGACCACGCAGGATGCAGGAGAGCTTTCCATCGATACCTCCTCGCCCATGCAGTCGGCCT
CACGGCTGTCGTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (47-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	54.958	93.634	0.515
pilU	Vibrio cholerae strain A1552	52.26	93.899	0.491
pilU	Acinetobacter baylyi ADP1	50.708	93.634	0.475
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.888	89.92	0.377
pilT	Acinetobacter baylyi ADP1	41.617	88.594	0.369
pilT	Acinetobacter baumannii D1279779	42.121	87.533	0.369
pilT	Acinetobacter nosocomialis M2	42.121	87.533	0.369
pilT	Acinetobacter baumannii strain A118	42.121	87.533	0.369
pilT	Pseudomonas stutzeri DSM 10701	41.124	89.655	0.369
pilT	Pseudomonas aeruginosa PAK	41.124	89.655	0.369