Detailed information NTG1063965

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACG3JE_RS00555
• Genome accession: NZ_CP171736
• Coordinates: 89311..89709 (+)
• Length: 132 a.a.
• NCBI ID: WP_003105619.1
• Uniprot ID: A0A0E2UAZ2
• Organism: Streptococcus parauberis strain DB-M17
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 84311..94709

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACG3JE_RS00515 (ACG3JE_00515)	-	84385..84597 (+)	213	WP_003108636.1	helix-turn-helix transcriptional regulator	-
ACG3JE_RS00520 (ACG3JE_00520)	-	84590..85042 (+)	453	WP_003108634.1	hypothetical protein	-
ACG3JE_RS00525 (ACG3JE_00525)	-	85051..85704 (+)	654	WP_013794395.1	CPBP family intramembrane glutamic endopeptidase	-
ACG3JE_RS00530 (ACG3JE_00530)	proC	85721..86491 (-)	771	WP_003104671.1	pyrroline-5-carboxylate reductase	-
ACG3JE_RS00535 (ACG3JE_00535)	pepA	86503..87570 (-)	1068	WP_003105090.1	glutamyl aminopeptidase	-
ACG3JE_RS00540 (ACG3JE_00540)	-	87933..88214 (+)	282	WP_003102775.1	DUF4651 domain-containing protein	-
ACG3JE_RS00545 (ACG3JE_00545)	-	88214..88531 (+)	318	WP_003103432.1	thioredoxin family protein	-
ACG3JE_RS00550 (ACG3JE_00550)	ytpR	88547..89173 (+)	627	WP_013794394.1	YtpR family tRNA-binding protein	-
ACG3JE_RS00555 (ACG3JE_00555)	ssbA	89311..89709 (+)	399	WP_003105619.1	single-stranded DNA-binding protein	Machinery gene
ACG3JE_RS00560 (ACG3JE_00560)	-	90178..91148 (+)	971	Protein_95	ABC transporter substrate-binding protein	-
ACG3JE_RS00565 (ACG3JE_00565)	-	91160..92143 (+)	984	Protein_96	ABC transporter substrate-binding protein	-
ACG3JE_RS00570 (ACG3JE_00570)	-	92178..93062 (+)	885	WP_013794392.1	ABC transporter permease	-
ACG3JE_RS00575 (ACG3JE_00575)	-	93071..93874 (+)	804	WP_003104647.1	ABC transporter ATP-binding protein	-
ACG3JE_RS00580 (ACG3JE_00580)	-	93957..94598 (-)	642	WP_003102694.1	deoxynucleoside kinase	-

Sequence

Protein

• Length: 132 a.a.
• Molecular weight: 15171.37 Da
• Isoelectric Point: 7.7086

>NTDB_id=1063965 ACG3JE_RS00555 WP_003105619.1 89311..89709(+) (ssbA) [Streptococcus parauberis strain DB-M17]
MYNRVIMIGRLVADPQLIKTPKDKSVCRVSVAVNRRYKNAQGERQVDFVNLVLWGKLAESLVSYGSKGSLISLEGELRTR
RYEKDGKNCYVTEVLCHTFQLLESRAQRAMRENNMTNDLSDLVLDEEDDLPF

Nucleotide

• Length: 399 bp

>NTDB_id=1063965 ACG3JE_RS00555 WP_003105619.1 89311..89709(+) (ssbA) [Streptococcus parauberis strain DB-M17]
ATGTACAATAGAGTAATCATGATAGGACGCTTAGTTGCCGACCCACAATTAATTAAGACACCGAAAGATAAGTCGGTTTG
TCGTGTTTCAGTTGCTGTTAATCGTCGTTATAAAAATGCTCAAGGTGAAAGGCAAGTGGACTTTGTCAATTTAGTTTTAT
GGGGGAAACTTGCTGAATCACTAGTTTCCTATGGTAGTAAAGGCAGCCTAATTTCTTTGGAAGGCGAGTTGCGAACACGT
CGCTATGAAAAAGATGGGAAGAACTGTTATGTGACCGAGGTTTTGTGTCATACTTTTCAATTATTAGAAAGTCGTGCGCA
GCGAGCAATGCGTGAAAATAACATGACGAATGATCTCTCTGACTTAGTTCTTGATGAGGAAGATGACCTACCTTTCTAA

Domains

Predicted by InterProScan.

• Single-strand binding protein family (SSB) (3-102)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.242	100	0.742
ssbB/cilA	Streptococcus mitis NCTC 12261	71.212	100	0.712
ssbB/cilA	Streptococcus pneumoniae D39	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae R6	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae Rx1	69.697	100	0.697
ssbB/cilA	Streptococcus pneumoniae TIGR4	68.939	100	0.689
ssbB	Streptococcus sobrinus strain NIDR 6715-7	68.182	100	0.682
ssbB/cilA	Streptococcus mitis SK321	68.182	100	0.682
ssbB	Lactococcus lactis subsp. cremoris KW2	54.464	84.848	0.462
ssb	Latilactobacillus sakei subsp. sakei 23K	45.133	85.606	0.386
ssbB	Bacillus subtilis subsp. subtilis str. 168	45.283	80.303	0.364