Detailed information NTG1056894

Bioinformatically predicted

Overview

• Name: comGC
• Type: Machinery gene
• Locus tag: ACFIOR_RS06310
• Genome accession: NZ_CP170409
• Coordinates: 1208683..1208994 (+)
• Length: 103 a.a.
• NCBI ID: WP_000472256.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain t359
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1203683..1213994

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFIOR_RS06280	-	1204466..1204669 (+)	204	WP_000087561.1	YqgQ family protein	-
ACFIOR_RS06285	-	1204666..1205652 (+)	987	WP_000161314.1	ROK family glucokinase	-
ACFIOR_RS06290	-	1205652..1205981 (+)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACFIOR_RS06295	-	1205978..1206601 (+)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACFIOR_RS06300	comGA	1206653..1207627 (+)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ACFIOR_RS06305	comGB	1207599..1208669 (+)	1071	WP_168768458.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACFIOR_RS06310	comGC	1208683..1208994 (+)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACFIOR_RS06315	comGD	1208972..1209418 (+)	447	WP_072433556.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACFIOR_RS06320	comGE	1209405..1209704 (+)	300	WP_199915398.1	competence protein ComGE	Machinery gene
ACFIOR_RS06325	comGF	1209622..1210119 (+)	498	WP_029694050.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACFIOR_RS06330	-	1210216..1210362 (+)	147	WP_001789879.1	hypothetical protein	-
ACFIOR_RS06335	-	1210352..1210876 (+)	525	WP_001015121.1	shikimate kinase	-
ACFIOR_RS06340	gcvT	1211035..1212126 (+)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACFIOR_RS06345	gcvPA	1212146..1213492 (+)	1347	WP_042727693.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-

Sequence

Protein

• Length: 103 a.a.
• Molecular weight: 11315.36 Da
• Isoelectric Point: 8.5268

>NTDB_id=1056894 ACFIOR_RS06310 WP_000472256.1 1208683..1208994(+) (comGC) [Staphylococcus aureus strain t359]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN

Nucleotide

• Length: 312 bp

>NTDB_id=1056894 ACFIOR_RS06310 WP_000472256.1 1208683..1208994(+) (comGC) [Staphylococcus aureus strain t359]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (6-30)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGC	Staphylococcus aureus MW2	100	100	1
comGC	Staphylococcus aureus N315	100	100	1
comGC/cglC	Streptococcus pneumoniae TIGR4	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae Rx1	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae D39	46.078	99.029	0.456
comGC/cglC	Streptococcus pneumoniae R6	46.078	99.029	0.456
comGC/cglC	Streptococcus mitis SK321	51.163	83.495	0.427
comGC/cglC	Streptococcus mitis NCTC 12261	51.163	83.495	0.427
comYC	Streptococcus gordonii str. Challis substr. CH1	42.857	95.146	0.408
comYC	Streptococcus suis isolate S10	50	75.728	0.379
comGC	Bacillus subtilis subsp. subtilis str. 168	41.758	88.35	0.369
comGC	Lactococcus lactis subsp. cremoris KW2	46.341	79.612	0.369