Detailed information
Bioinformatically predicted
Overview
| Name | comYC | Type | Machinery gene |
| Locus tag | ACE8TC_RS01055 | Genome accession | NZ_CP170114 |
| Coordinates | 206631..206906 (+) | Length | 91 a.a. |
| NCBI ID | WP_029487321.1 | Uniprot ID | - |
| Organism | Enterococcus gallinarum strain 933p | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 201631..211906
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE8TC_RS01030 (ACE8TC_01030) | - | 201764..202975 (+) | 1212 | WP_029487323.1 | ABC transporter permease | - |
| ACE8TC_RS01035 (ACE8TC_01035) | - | 203080..203859 (+) | 780 | WP_003128432.1 | phosphotransferase family protein | - |
| ACE8TC_RS01040 (ACE8TC_01040) | trmB | 203913..204575 (+) | 663 | WP_003128433.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| ACE8TC_RS01045 (ACE8TC_01045) | comGA | 204687..205628 (+) | 942 | WP_005472888.1 | competence type IV pilus ATPase ComGA | - |
| ACE8TC_RS01050 (ACE8TC_01050) | comGB | 205603..206634 (+) | 1032 | WP_005472886.1 | competence type IV pilus assembly protein ComGB | - |
| ACE8TC_RS01055 (ACE8TC_01055) | comYC | 206631..206906 (+) | 276 | WP_029487321.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACE8TC_RS01060 (ACE8TC_01060) | comGD | 206875..207354 (+) | 480 | WP_003128438.1 | competence type IV pilus minor pilin ComGD | - |
| ACE8TC_RS01065 (ACE8TC_01065) | - | 207365..207646 (+) | 282 | WP_005472881.1 | hypothetical protein | - |
| ACE8TC_RS01070 (ACE8TC_01070) | comGF | 207636..208049 (+) | 414 | WP_003128440.1 | competence type IV pilus minor pilin ComGF | - |
| ACE8TC_RS01075 (ACE8TC_01075) | comGG | 208024..208377 (+) | 354 | WP_003128441.1 | competence type IV pilus minor pilin ComGG | - |
| ACE8TC_RS01080 (ACE8TC_01080) | - | 208552..209559 (+) | 1008 | WP_003128442.1 | class I SAM-dependent methyltransferase | - |
| ACE8TC_RS01085 (ACE8TC_01085) | - | 209584..210768 (+) | 1185 | WP_003128443.1 | acetate/propionate family kinase | - |
| ACE8TC_RS01090 (ACE8TC_01090) | - | 210982..211293 (-) | 312 | WP_005472877.1 | DUF1048 domain-containing protein | - |
| ACE8TC_RS01095 (ACE8TC_01095) | - | 211303..211644 (-) | 342 | WP_003128445.1 | DUF1048 domain-containing protein | - |
Sequence
Protein
Download Length: 91 a.a. Molecular weight: 10464.26 Da Isoelectric Point: 6.4633
>NTDB_id=1055082 ACE8TC_RS01055 WP_029487321.1 206631..206906(+) (comYC) [Enterococcus gallinarum strain 933p]
MRKLKHQGFTLVEMLIVLLVISILILLFVPNLSAQRTVIDEKGNAAIVKVVETQIELFQLNENRTPTRQELLAGNYVTEE
QYAIYLAHRNE
MRKLKHQGFTLVEMLIVLLVISILILLFVPNLSAQRTVIDEKGNAAIVKVVETQIELFQLNENRTPTRQELLAGNYVTEE
QYAIYLAHRNE
Nucleotide
Download Length: 276 bp
>NTDB_id=1055082 ACE8TC_RS01055 WP_029487321.1 206631..206906(+) (comYC) [Enterococcus gallinarum strain 933p]
ATGAGAAAATTGAAGCATCAAGGGTTCACATTGGTGGAGATGCTGATTGTACTGTTAGTGATCAGTATTTTGATTTTATT
GTTTGTACCAAACTTATCCGCACAACGTACAGTGATAGATGAGAAAGGAAATGCGGCAATCGTCAAAGTCGTAGAAACCC
AGATTGAGTTGTTCCAGCTTAATGAGAATCGAACACCTACTCGACAAGAATTACTAGCTGGAAATTATGTAACGGAGGAG
CAGTATGCGATTTACCTTGCCCATCGGAACGAATAG
ATGAGAAAATTGAAGCATCAAGGGTTCACATTGGTGGAGATGCTGATTGTACTGTTAGTGATCAGTATTTTGATTTTATT
GTTTGTACCAAACTTATCCGCACAACGTACAGTGATAGATGAGAAAGGAAATGCGGCAATCGTCAAAGTCGTAGAAACCC
AGATTGAGTTGTTCCAGCTTAATGAGAATCGAACACCTACTCGACAAGAATTACTAGCTGGAAATTATGTAACGGAGGAG
CAGTATGCGATTTACCTTGCCCATCGGAACGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYC | Streptococcus suis isolate S10 |
51.613 |
100 |
0.527 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
50.538 |
100 |
0.516 |
| comYC | Streptococcus mutans UA159 |
48.387 |
100 |
0.495 |
| comYC | Streptococcus mutans UA140 |
48.387 |
100 |
0.495 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae D39 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus pneumoniae R6 |
48.352 |
100 |
0.484 |
| comGC/cglC | Streptococcus mitis SK321 |
51.765 |
93.407 |
0.484 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
50 |
96.703 |
0.484 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
48.315 |
97.802 |
0.473 |
| comGC | Staphylococcus aureus MW2 |
44.872 |
85.714 |
0.385 |
| comGC | Staphylococcus aureus N315 |
44.872 |
85.714 |
0.385 |