Detailed information
Bioinformatically predicted
Overview
| Name | ssbB/cilA | Type | Machinery gene |
| Locus tag | ACD268_RS09320 | Genome accession | NZ_CP168299 |
| Coordinates | 1826426..1826821 (-) | Length | 131 a.a. |
| NCBI ID | WP_000282467.1 | Uniprot ID | A0A098Z0L0 |
| Organism | Streptococcus pneumoniae strain FC1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1821426..1831821
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACD268_RS09295 (ACD268_09295) | - | 1821651..1822184 (+) | 534 | WP_000775321.1 | DUF402 domain-containing protein | - |
| ACD268_RS09300 (ACD268_09300) | - | 1822539..1822745 (-) | 207 | WP_000775827.1 | transcriptional regulator | - |
| ACD268_RS09305 (ACD268_09305) | - | 1822905..1824134 (+) | 1230 | WP_000436406.1 | ISL3 family transposase | - |
| ACD268_RS09310 (ACD268_09310) | groL | 1824234..1825856 (-) | 1623 | WP_000031585.1 | chaperonin GroEL | - |
| ACD268_RS09315 (ACD268_09315) | groES | 1825872..1826156 (-) | 285 | WP_000917339.1 | co-chaperone GroES | - |
| ACD268_RS09320 (ACD268_09320) | ssbB/cilA | 1826426..1826821 (-) | 396 | WP_000282467.1 | single-stranded DNA-binding protein | Machinery gene |
| ACD268_RS09325 (ACD268_09325) | - | 1826898..1827659 (-) | 762 | WP_001107745.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| ACD268_RS09330 (ACD268_09330) | ytpR | 1827692..1828318 (-) | 627 | WP_000578309.1 | YtpR family tRNA-binding protein | - |
| ACD268_RS09335 (ACD268_09335) | - | 1828334..1828651 (-) | 318 | WP_000615767.1 | thioredoxin family protein | - |
| ACD268_RS09340 (ACD268_09340) | - | 1828648..1828947 (-) | 300 | WP_001013974.1 | DUF4651 domain-containing protein | - |
| ACD268_RS09345 (ACD268_09345) | - | 1829145..1829207 (-) | 63 | WP_219300018.1 | hypothetical protein | - |
| ACD268_RS09350 (ACD268_09350) | - | 1829232..1829423 (-) | 192 | WP_000291826.1 | cell wall-binding protein | - |
| ACD268_RS09355 (ACD268_09355) | - | 1829584..1830258 (-) | 675 | WP_000725719.1 | hypothetical protein | - |
| ACD268_RS09360 (ACD268_09360) | - | 1830263..1830709 (-) | 447 | WP_000776589.1 | LytTR family DNA-binding domain-containing protein | - |
| ACD268_RS09365 (ACD268_09365) | - | 1830823..1831326 (-) | 504 | WP_044789202.1 | phosphatase PAP2 family protein | - |
| ACD268_RS09370 (ACD268_09370) | - | 1831323..1831685 (-) | 363 | WP_000078805.1 | DUF2200 domain-containing protein | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14925.89 Da Isoelectric Point: 5.9409
>NTDB_id=1043733 ACD268_RS09320 WP_000282467.1 1826426..1826821(-) (ssbB/cilA) [Streptococcus pneumoniae strain FC1]
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
MYNKVIMIGRLTSTPELHKTNNDKSVARATIAVNRRYKDQNGEREADFVNMVLWGRLAETLASYATKGSLISVDGELRTR
RFEKNGQMNYVTEVLVTGFQLLESRAQRAMRENNAGQDLADLVLEEEELPF
Nucleotide
Download Length: 396 bp
>NTDB_id=1043733 ACD268_RS09320 WP_000282467.1 1826426..1826821(-) (ssbB/cilA) [Streptococcus pneumoniae strain FC1]
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTTCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
ATGTATAATAAAGTTATCATGATTGGGCGTTTAACGTCTACACCAGAATTGCACAAAACCAACAATGACAAGTCGGTAGC
GCGAGCAACTATCGCTGTGAACCGTCGTTACAAAGACCAAAACGGTGAACGTGAAGCTGATTTTGTCAATATGGTCCTAT
GGGGCAGGCTAGCAGAAACTTTGGCAAGCTACGCAACCAAAGGTAGTCTCATTTCCGTTGATGGAGAATTGCGTACCCGT
CGCTTTGAGAAAAATGGTCAGATGAACTATGTAACCGAAGTTCTTGTGACAGGATTCCAACTCTTAGAAAGTCGTGCTCA
ACGTGCCATGCGTGAAAATAATGCAGGCCAAGATTTGGCAGATTTGGTCTTGGAAGAGGAAGAATTGCCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbB/cilA | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| ssbB/cilA | Streptococcus pneumoniae TIGR4 |
99.237 |
100 |
0.992 |
| ssbB/cilA | Streptococcus mitis SK321 |
98.473 |
100 |
0.985 |
| ssbB/cilA | Streptococcus mitis NCTC 12261 |
98.473 |
100 |
0.985 |
| ssbA | Streptococcus mutans UA159 |
74.809 |
100 |
0.748 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
70.229 |
100 |
0.702 |
| ssbB | Lactococcus lactis subsp. cremoris KW2 |
59.821 |
85.496 |
0.511 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
50.943 |
80.916 |
0.412 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
46.903 |
86.26 |
0.405 |